Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq12 360 6e-97
>seq12
Length=476517
Score = 360 bits (398), Expect = 6e-97
Identities = 260/302 (86%), Gaps = 14/302 (5%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389634 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 389693
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 389694 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 389753
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||| | || ||||||||||||||||| ||| |||| || ||||||||||||||||||
Sbjct 389754 GGCCAGTAAATGACCTTAACGCCAGAAATTGGGCGGTAAAACCCAGTTCCGCTTCATTGA 389813
Query 187 TTAAGT-----------aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235
||||| |||||||||||||||||||||||||||||| || |||
Sbjct 389814 ATAAGTAAAAAAANNNNAAAAAAACGATAAGGGTAGTGGTATTTCAC---CGGCGATTGC 389870
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
||||||| ||||||||||| | | ||| |||||||| ||| ||||||||||||||||
Sbjct 389871 TCTCCCACCTATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCA 389930
Query 296 AC 297
||
Sbjct 389931 AC 389932
Score = 257 bits (284), Expect = 5e-66
Identities = 144/145 (99%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 390361 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 390420
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 390421 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 390480
Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441
|||||||||||||||||||||||||
Sbjct 390481 ACGAGGCATTTGGCTACCTTAAGAG 390505
Score = 168 bits (186), Expect = 2e-39
Identities = 99/103 (96%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 390944 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTATTTGAATTACTTCACTTTGACATTC 391003
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 391004 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 391046
Score = 158 bits (174), Expect = 4e-36
Identities = 92/95 (97%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399995 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 400054
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101
|||||||||||||||||||||||||||||||| ||
Sbjct 400055 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCTCA 400089
Score = 104 bits (114), Expect = 8e-20
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518
|||||||||||||||| ||||||| |||||||||||| ||||| |||| ||| |||||
Sbjct 436205 CCGTTTACCCGCGCTTATTTGAATTACTTCACTTTGACCTTCAGGGCACCCGGCTGAAAT 436146
Query 519 CACATTGCGTCAACATCACTTTCTG 543
||||||||| |||| |||||||||
Sbjct 436145 TACATTGCGTTAACACCACTTTCTG 436121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635198626432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |