Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12 226 5e-57 >seq12 Length=476517 Score = 226 bits (250), Expect = 5e-57 Identities = 222/280 (79%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| | Sbjct 389310 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 389253 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 389252 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 389193 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | | | || |||| ||||||||||||||||||||||||||||| | || Sbjct 389192 GAACGCGACATTGTTGCCCCGCACGTCGTAGTCGGATACGAATAGGCTTCGGCCAGGCAC 389133 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAG-CGCGGGGCGCTCAGCTGGCGGATTGC 239 | | |||| || || || | || ||||| | | || | || | | ||||| | Sbjct 389132 CCCAACAGGTCGACAGCGCCCTTCGGAGGGAAGTCTCCGGAGGGTC-GTCGACGGATAGT 389074 Query 240 AATTTCACCATGCGCAGGGA-TAAATCCTTTGCAGACGAC 278 ||||| | | | || |||| || | ||| |||||||||| Sbjct 389073 CATTTCGCAACGGGCGGGGAGTAGAACCTCTGCAGACGAC 389034 Score = 226 bits (250), Expect = 5e-57 Identities = 222/280 (79%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| | Sbjct 399671 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 399614 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 399613 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 399554 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | | | || |||| ||||||||||||||||||||||||||||| | || Sbjct 399553 GAACGCGACATTGTTGCCCCGCACGTCGTAGTCGGATACGAATAGGCTTCGGCCAGGCAC 399494 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAG-CGCGGGGCGCTCAGCTGGCGGATTGC 239 | | |||| || || || | || ||||| | | || | || | | ||||| | Sbjct 399493 CCCAACAGGTCGACAGCGCCCTTCGGAGGGAAGTCTCCGGAGGGTC-GTCGACGGATAGT 399435 Query 240 AATTTCACCATGCGCAGGGA-TAAATCCTTTGCAGACGAC 278 ||||| | | | || |||| || | ||| |||||||||| Sbjct 399434 CATTTCGCAACGGGCGGGGAGTAGAACCTCTGCAGACGAC 399395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199333376