Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 309 2e-79 >seq4 Length=4919768 Score = 309 bits (342), Expect = 2e-79 Identities = 1165/1804 (65%), Gaps = 50/1804 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | | |||||| | || | ||||||||||||||||| Sbjct 3840936 ATCGACAGTGAACTGGATAGGCTGGGTGGCCGCCATTGTGCGCAGATAGTACATGCCGGT 3840995 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || ||| | ||||||||| | | | || |||| | |||| | Sbjct 3840996 CTTGAGCCCCATTTTCCATCCCGCGAAATGCAT-GCTAGTGATCTTGCCCATGGTCGGTT 3841054 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | ||||| |||||||||| | ||| || || || |||| Sbjct 3841055 CCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATGAAGGCACCGCGGTCCGCTGCCA 3841114 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCTCA 65314 | | | || ||| || ||||| |||||||| || || || | | || Sbjct 3841115 TTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGGTCTTATAGAGAGCTTTG-ATGTCT 3841173 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | |||| ||||| || || | || || || ||||| ||| Sbjct 3841174 GCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTTCGGCTATGATTCGATTCTTCATA 3841233 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||||||| ||||| || | |||| | | ||| | || | ||||||| Sbjct 3841234 TTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGCAACCATGGGTTAACGACTTGG 3841293 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || |||| || ||||| || ||||| || |||||| ||||| || |||| Sbjct 3841294 AATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACATTCG 3841353 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||||||||| || | || || ||||| ||||| || ||||| | || ||||| Sbjct 3841354 TTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTG 3841413 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 || | || | | |||| | | ||| |||||| | ||||| ||| || Sbjct 3841414 CGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCCCACA--GGTC---CG 3841468 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTGAACC 65670 | | ||| |||||| || | ||| || | || || || || | | || Sbjct 3841469 AGGGAGTG-ACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGCTG----CC 3841523 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 | | | || || ||||| ||||||||| |||| || || ||| || || Sbjct 3841524 CTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGC 3841583 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 | |||||||| || || || | ||| |||| | ||||| || | || Sbjct 3841584 ATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCAAAGGG 3841643 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | || || | || | ||||| ||||||||||| || | ||||| || ||||| Sbjct 3841644 AAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATG 3841703 Query 65851 ACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909 || || ||| | ||| || || || || || ||||| ||||||||||| || | Sbjct 3841704 TCGGAAGTTGCT-CTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGT 3841762 Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTT 65967 | | ||||| || ||||| || | ||| || | | | | || ||| | || Sbjct 3841763 TTAGGTTGCGAGTGACCACTTGA--GTTACCTCATGAAGACGACCAAAGTCATA---TTC 3841817 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 | ||| ||| || |||| || | || || || || || || || ||||| Sbjct 3841818 ACCTCGA--------GCCTGAT-CCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCA 3841868 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 ||||| | |||||||||||| ||| | |||||||| |||||||| || || || || Sbjct 3841869 CACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCG 3841928 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 ||||| ||||| |||| || || ||||| | |||||| || |||||||| | |||||| Sbjct 3841929 GATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTA 3841988 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 || || || ||||| || | ||| | ||| || | ||| || | ||||| || Sbjct 3841989 GGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAAC 3842048 Query 66208 CGTACGT--ACCGC--CCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 ||| | ||| | || |||| ||||| ||||| || | | |||| | Sbjct 3842049 CGTCTGGCGACCACGTCCCTCCTTC----TCGTATCTCTCGTACAGTTCCTTGAAGTCGT 3842104 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | || | || || | |||| || || || || || | || | ||| || | Sbjct 3842105 CGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGT 3842164 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || || ||||| ||| || | ||||| |||| ||||| ||||| | ||||||| Sbjct 3842165 TCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTG 3842224 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 ||| ||| || ||||||| || || |||| || | ||| || || | ||| || | Sbjct 3842225 CTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGT 3842284 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||||||||| ||||||||||| || | || ||| ||| || || |||||||||| Sbjct 3842285 GCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGT 3842344 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 ||||||| |||||||||||| || | ||| || | ||| || || || ||||||||| Sbjct 3842345 AGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGG 3842404 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | || | || ||||||| || || || || |||| || |||||||| |||| Sbjct 3842405 TCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGG 3842464 Query 66624 CCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 | ||||| || || |||||| || | | |||| | ||||| || ||| ||| Sbjct 3842465 CAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTC--ATAGATGCCCTCGATGCTGTC 3842522 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 | || ||| | | | |||| || || || |||| ||||| |||| ||| Sbjct 3842523 TTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAA 3842582 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 || ||||||| |||||| || ||| | | | |||||| ||||| ||||| || | Sbjct 3842583 CAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAGC 3842642 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCC 66860 |||| || ||||||||||| || | || |||| ||||| || | || ||| || | Sbjct 3842643 CTTTTCAACGTCGTCGCCATGAATACCAACTGCCACA-CGCATGAGCATGTGTTGGGGAC 3842701 Query 66861 GTTC 66864 |||| Sbjct 3842702 GTTC 3842705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567592989760