Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq17 107 7e-18 >seq17 Length=207847 Score = 107 bits (118), Expect = 7e-18 Identities = 113/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| ||||||||||||| | | |||||||| || | || ||||| ||||| | Sbjct 139736 CAATCGTCATGCGAGAGGGAATGGCGTGCGGGTTGATAATCAGATCGGGCACAATGCCTT 139795 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||| |||||||| ||| || || ||| ||| |||||| || ||||| || || Sbjct 139796 CTCGTGTAAAAGGCATATCCTCGTGACGGTACG-TGATACCAATTGTGCCCTTCTGACCA 139854 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | |||||| ||||| || ||||| || Sbjct 139855 TGGCGAGATGCAAATTTATCGCCGAT 139880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884884371391012