Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq23 120 8e-25 >seq23 Length=26795 Score = 120 bits (132), Expect = 8e-25 Identities = 193/275 (70%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 19483 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 19424 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 19423 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 19364 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTA--GCT 183 || | || | || ||||||||||| ||||| | |||| | || | ||| || Sbjct 19363 CCCTCATCGGTAAGGCCGCCGTTTGTCGGGGATCTCTTCAAAACCTAGCTTTTTAATTCT 19304 Query 184 AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 || | ||| | | || ||| |||||||||| | |||||| | ||| || | | Sbjct 19303 AAGCAAATCCGTCACCCAGCCGACACCGGGCAGACATCACACTCAATATATCGATGTCTA 19244 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || |||||||||| |||||| |||||||||||| Sbjct 19243 TCTTAGCAGAGTGCTCTGTTTTAAATAAACAGTCG 19209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799710016