Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq22 363 2e-98 >seq22 Length=9107 Score = 363 bits (402), Expect = 2e-98 Identities = 236/258 (91%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 5890 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAG 5949 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 5950 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 6008 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || | |||| | ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 6009 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 6068 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 6069 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 6128 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 6129 AAGAGCTATCAATCTGTC 6146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799822463