Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq22 796 0.0 seq11 163 9e-38 >seq22 Length=9107 Score = 796 bits (882), Expect = 0.0 Identities = 499/537 (93%), Gaps = 3/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1973 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 2032 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2033 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 2092 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | || |||||||||||||||| ||| || | || |||||||||||||||||| Sbjct 2093 GGCCAGTAAATGACCTTAACGCCAGAAGTTGGGCGATAAAACCCAGTTCCGCTTCATTGA 2152 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||||||||||||||||||||||||| || ||| ||||||| || Sbjct 2153 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCAC---CGGCGATTGCTCTCCCACCTA 2209 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 2210 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 2269 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2270 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 2329 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2330 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 2389 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2390 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTATTTGAATTTCA 2449 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2450 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2506 >seq11 Length=3585204 Score = 163 bits (180), Expect = 9e-38 Identities = 125/143 (87%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 14 TCTACAGGAGATTTCTGTTCT-CCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72 ||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||| | Sbjct 2421781 TCTACTGGAGGTTTCTGTTCTGCCATGAGTCCCCTGGAGGACACCTGCGTTATGGTTTTA 2421722 Query 73 CAGATGTGCCG-CCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG-GCC 130 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||| Sbjct 2421721 CAGATGTGCCGCCCCCAGCCAAACTCCCCATCTGACAATGTCTTCAACCCGGATCGCGCC 2421662 Query 131 CG-CGAAGGACCTTAACGCCAGA 152 | ||| || || ||| ||||| Sbjct 2421661 AGTAGAATGAGCTCAACACCAGA 2421639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199623904