Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10 354 6e-93 >seq10 Length=3900288 Score = 354 bits (392), Expect = 6e-93 Identities = 1159/1775 (65%), Gaps = 62/1775 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| || || | | | || ||| |||| | || ||||||||||||||| Sbjct 3136830 TCGACAGTGAATTGAATGGGTTGTGTGGCAGCCATGGTGCGGAGGTAGTACATGCCGGTC 3136771 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| || ||| || || ||||| |||| | ||||||| | |||| || Sbjct 3136770 TTGAGACCCATCTTCCAGCCAGCAAAGTGCATGGATG-TGATTTTGCCCATGGTCGGTTC 3136712 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || |||| || || ||| |||||| | ||| || ||||| ||||| Sbjct 3136711 CTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGATGAAGGCACCTCGGTCTGCCGCCAT 3136652 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| ||| || |||||||| |||||||||| || | | | ||| Sbjct 3136651 TTGGAGGATTGTCCGTTGACTGATTTCCCAGACAGTCTTGTACAA-CGCCTTGATGTCAG 3136593 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 || || | |||| ||| |||||||||| | || ||||| || || ||| Sbjct 3136592 CAGGGATGTTGGGGATGTTCTGAACTGAACCACCATCGGCGATAATACGGTTCTTCATGT 3136533 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTG 65433 |||||||| | || | |||| || | || ||| || | | |||| ||| || Sbjct 3136532 TGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCAAC--AGCCATGGGTTGACGACCTG 3136475 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||||| || | ||| ||||| ||| |||||||||||| || || |||||| |||| Sbjct 3136474 AAACTCACCAGCCAGGACACGGCGGGAATAGATGTTGGAAGTATATGGCTCAAAGCATTC 3136415 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 ||||||| ||||| || | || || || || ||||||||||| || | || ||||| Sbjct 3136414 GTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGCATGGGAGCAACAAGCAGAGAGTT 3136355 Query 65554 TCGCAATCCGTTCATTT--CAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || | |||| |||| |||||| | || | |||||||| ||||| ||| Sbjct 3136354 GCGAACCCCGT--ATTTGGCAATGTCGGCCTTCAGTGAGTCCCAGTCCCACA--GGT--- 3136302 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTGA 65667 || | || |||||| || | ||| || || || || ||||| | Sbjct 3136301 -CGGAAGGAGTAACATTCCACATGTCGTATTGGAGAGTGCCTTGGGAGACTGGGCTC--- 3136246 Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727 || | | | || || | || | |||| | ||||| | || | ||| || Sbjct 3136245 -CCCTCGTATGTTTCATAGGCGCCTTGCTCCCTTGCAAGCTCGCATGAAGCAGTGAGAGC 3136187 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || ||||||||||| || || | || |||| || ||||| || | Sbjct 3136186 AGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAGTCAAA 3136127 Query 65788 CGGCATACCCATCAGGACAAA-AGTG--TCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 |||| || || || ||| | || || || ||||||||||| |||| ||| || || Sbjct 3136126 GGGCAGACGCA---GGGCAAGGAATGCATCAGCAAGACCTTGAACACCAAGACCAATAGG 3136070 Query 65845 ACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 || || |||| ||| | ||| | |||| || ||||| ||||| ||||| ||||| | Sbjct 3136069 GCGGTGTCGCATGTTGCT-CTTCTTGGCCTCTGGCACAGGATAGTAGTTGATGTCGATGA 3136011 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAA 65962 | ||||||||||| |||||||| || || ||| | | | |||| ||| | Sbjct 3136010 TCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGG-AGGCGGCCGAAGTCATAC 3135952 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | || | ||| | ||||| | ||||| || ||||| || || Sbjct 3135951 T------------CGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAAGCCAGA 3135904 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||||||||| | ||| || || || || ||||||||||| |||||||| ||||| | Sbjct 3135903 TTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAG 3135844 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | || ||||| ||||| |||| || || ||||| | ||||| ||||||||||| | | Sbjct 3135843 CTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGC 3135784 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||||| ||||| || |||||| |||| ||||| |||||| | ||| || | ||| Sbjct 3135783 ATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCC 3135724 Query 66203 TTCACCGT---ACG--TACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGA 66257 || || || ||| || ||||| |||| |||||| |||||||| | | || Sbjct 3135723 TTGACTGTCTGACGGCCACGGCCCT-CCTT----TTCGTATCTCTCGTAGAGCTCCTTGA 3135669 Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 || || || | || |||| |||| |||| | || || || | || | ||| | Sbjct 3135668 AGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTCCATT 3135609 Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | | || || ||||| ||| || | || || |||| | || ||||| | | Sbjct 3135608 CCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGT 3135549 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | || || || ||||| ||||||| || || | | || | ||||||||||| | Sbjct 3135548 CACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGACAT 3135489 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 |||| ||||| || |||| |||||||||||| | |||| || || ||| || |||| Sbjct 3135488 CGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGT 3135429 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 |||||||||| || || ||||| ||||| | ||| || | ||| || || || | | Sbjct 3135428 CGACGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTC 3135369 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 ||||||| || | || |||||| ||| || || |||| |||| || ||||||| Sbjct 3135368 CATTGGTTCCTGCAATATAGGATCCCGTTGCACGAATGCAGTGAGCATTGAGGCCAATAC 3135309 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAAT 66675 |||| || ||||| ||||| ||||| || | | |||| | | || || || || Sbjct 3135308 CACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTC--GTAGATACCCTCGAT 3135251 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 | ||| |||| ||| | | | |||| || || ||||| | || || | || Sbjct 3135250 GCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGC 3135191 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795 |||||| || || | || || || ||| | | | |||||| |||||| ||||| Sbjct 3135190 ATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTCTGGGACATGAGATTGTATGTCTC 3135131 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 |||| | ||||| | ||||| || || |||| Sbjct 3135130 GATGGCCTTCTCAATATCGTCGCCGTGGATGCCGA 3135096 Score = 86.0 bits (94), Expect = 5e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 9150 GGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATACG 9209 |||||| | || || ||||||||||| |||||||| || | |||| || |||| || Sbjct 1103027 GGCCCCGTGTATGGCTTCCAGTGGCGCCATTTCGGCGCACAATACACGGACTGTCGAACA 1102968 Query 9210 GACTATACGGGCCAAGGTGTGGATCAG 9236 ||||||||||||||||| ||||||||| Sbjct 1102967 GACTATACGGGCCAAGGCGTGGATCAG 1102941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567888556720