Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq378 118 3e-24 >seq378 Length=2185 Score = 118 bits (130), Expect = 3e-24 Identities = 194/277 (70%), Gaps = 6/277 (2%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 505 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 446 Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||| Sbjct 445 ATCGTTACATCATTCATGCAAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGG 386 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG---- 181 ||| | || | || ||||||||||| ||||| | |||| ||| | || || Sbjct 385 ACCCTCATCGGTAAGGCCGCCGTTTGTCGGGGATCTCTTCAA-AGCCTAGCTTTTTAATT 327 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 |||| | ||| | | || ||| |||||||||| | |||||| | ||| || | | Sbjct 326 CTAAGCAAATCCGTCACCCAGCCGACACCGGGCAGACATCACACTCAATATATCGATATC 267 Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || |||||||||| |||||| |||||||||||| Sbjct 266 TATCTTAGCAGAGTGCTCTGTTTTAAATAAACAGTCG 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260794149888