Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq421 212 1e-52 seq356 152 8e-35 >seq421 Length=925 Score = 212 bits (234), Expect = 1e-52 Identities = 138/152 (91%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 107 TCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTT 166 ||||||||||| || || || | |||| | ||||||||||||||| ||||||||||| Sbjct 1 TCTAAGAAGCCGGCGGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTT 60 Query 167 CGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 120 Query 227 CCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| |||||||||||||||||||||||||| Sbjct 121 CCATACAATCAAGAAAGAGCTATCAATCTGTC 152 >seq356 Length=2770 Score = 152 bits (168), Expect = 8e-35 Identities = 98/106 (92%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 105 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAG 46 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106 ||||||||||||||| ||||||||||||| | |||||| |||||| Sbjct 45 ACCTGTTATTGCCTCGTACTTCCATTGGCTTG-AGCCAAAAGTCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796418384