Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq91 315 6e-81 seq2 114 1e-20 >seq91 Length=177601 Score = 315 bits (348), Expect = 6e-81 Identities = 1003/1536 (65%), Gaps = 52/1536 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||||| || |||||||| |||| || ||||| || ||||| || || ||| | Sbjct 134326 GATTGACAACCTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACG 134385 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| ||| |||| ||||||| || ||||| | ||| || ||||| ||||||||||| | Sbjct 134386 GTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAA 134445 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 | | | ||||| || | || | | |||| | | ||| ||||||| | || Sbjct 134446 CAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCC 134505 Query 65601 ACATCGGTTTATCGTC-GACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GAT 65655 ||| | | | | ||||| | ||||| || | ||| || | || || Sbjct 134506 ACAA-GTCTGAGGGAGTGACATTC------CACATGTCGTATTGAAGAATGCCTTGCGAC 134558 Query 65656 ACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715 ||||| | | || | | | || || ||||| |||||| || |||| ||| Sbjct 134559 ACTGGGCTG----CCTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGA 134614 Query 65716 GGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTC 65775 | ||| || ||| || ||||||||||| || | ||| | || | ||||| Sbjct 134615 AGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTC 134674 Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835 ||| | || | || || | | || | |||||| |||||||||||||| | Sbjct 134675 GGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAG 134734 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGA 65894 ||||| ||| || || || || ||| | ||| ||| ||||| ||||||||||| |||| Sbjct 134735 ACCGACGGGTCGGTGTCGGAAGTTGCT-CTTCTTCGCTTCAGGGACAGGGTAGTAGTTGA 134793 Query 65895 TATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTC 65952 |||||||||| || | ||||| ||||| || || || | || | | | | Sbjct 134794 TATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAGTGA--CCTCATGAAGACGACC 134851 Query 65953 GAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAG 66012 ||| ||| | || | ||| | | | || || || | || || || || Sbjct 134852 GAAGTCATA---TTCACCTCGAGCTTG---GTCG------ACGAATGTCGGGAGAGCCAG 134899 Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 || || || ||||| ||||| | ||| || ||||| || || |||||||| || ||||| Sbjct 134900 GGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCA 134959 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 ||||| || || ||||| ||||| |||| || || ||||| | |||||| || || Sbjct 134960 AAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTC 135019 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||||| | ||| || || || || || || || | ||| | ||| || | ||| || Sbjct 135020 CTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAG 135079 Query 66193 AGCGCGTGCCTTCACCGTACGT-----ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247 | ||||| || || | || ||||| |||| || || ||||| Sbjct 135080 TTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCT-CCTTC----TCATATCTCTCGTAT 135134 Query 66248 AG-GTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 || | ||| ||| ||||| | || |||| || | || || || ||||| | Sbjct 135135 AGAGCGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAA 135193 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || | ||| || | || || ||||| ||| || | ||||| |||| | ||| Sbjct 135194 GAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGC 135253 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 |||||| | |||||||||| ||| || ||||||| || || | || || | || Sbjct 135254 GTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAA 135313 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 || || | ||| || |||||||| || ||||||||||| || | || || || Sbjct 135314 GTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATT 135373 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 |||||| || |||||||||||||| ||| |||||||| || | ||| || | ||||| Sbjct 135374 GCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCC 135433 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATT 66606 ||| || |||| |||||||| | ||| ||||||| || || || || |||| Sbjct 135434 GTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATT 135493 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAAT 66664 ||||||||||| || || ||||| ||||| |||||| || | |||| || Sbjct 135494 GAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC--ATAT 135551 Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 || || || ||| ||| | || ||| | | | | || || ||||| |||| Sbjct 135552 ATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGA 135611 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || || |||| ||| |||||||| | |||||| |||||| | | | |||||| | Sbjct 135612 GGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGA 135671 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCAT 66843 ||||||||||||||| | ||||| | |||| ||||| || | || |||| ||||| Sbjct 135672 TTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACA-CGCAT 135730 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 || | || ||| |||||||| | | ||| || | | | ||| || | || Sbjct 135731 AAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 135790 Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| ||||||| |||||| || ||| ||||| || Sbjct 135791 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTC 135826 >seq2 Length=1089760 Score = 114 bits (126), Expect = 1e-20 Identities = 339/507 (67%), Gaps = 27/507 (5%) Strand=Plus/Minus Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 ||||||||| |||||||||| |||||||| ||||||| || || || | | ||| | Sbjct 280166 ATGGAGAATATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTATGTAAAGGACCCC 280107 Query 61381 GCGGAACGTGAACG---AT-TGTTCAATGCCATCGAGACGATACCG-GCGGTGAAGCG-G 61434 || | ||| || ||||| | |||||||| || || || || | || | Sbjct 280106 ----AAAGAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCATTC--GCAAG 280053 Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGA 61491 ||||| || ||||| || | || |||| | ||| |||| | | | |||| ||||| Sbjct 280052 AAAGCAGACTGGGCTCTGCGAT-GGAT-ATCAG-ACAAAGAGTCGAGCTTTGCCCAACGA 279996 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 | |||| || || | ||||| || | || ||| |||||| ||||| | ||||| Sbjct 279995 CTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTC 279936 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| |||||| ||||| |||||||| || |||||| ||| ||| | || || || Sbjct 279935 TGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGT 279876 Query 61612 GACGAGGGCATGCATTGTGATTTTGC-TG--TTTTGCTATTCAAACGCTATCTGGTGAAT 61668 |||||||||||||| || ||||| || ||||| || ||| ||||| | | Sbjct 279875 GACGAGGGCATGCACACGGACTTTGCGTGCCTTTTG--ATGCAA----CATCTGCAGCAC 279822 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 ||| | | | | | ||| | || || || | |||||| ||||| Sbjct 279821 AAGCCGGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAA 279762 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || || || || || | |||||| |||| |||||||||| | || |||| ||| Sbjct 279761 TTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAG 279702 Query 61789 TATATTGAATTTGTTGCCGACCGTCTG 61815 || ||||| |||||||| ||||||||| Sbjct 279701 TACATTGAGTTTGTTGCTGACCGTCTG 279675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565751752960