Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 320 1e-82 seq1 114 1e-20 >seq2 Length=7068955 Score = 320 bits (354), Expect = 1e-82 Identities = 1004/1536 (65%), Gaps = 52/1536 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||||| || |||||||| |||| || ||||| || ||||| || || ||| | Sbjct 2066632 GATTGACAACCTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACG 2066691 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| ||| |||| ||||||| || ||||| | ||| || ||||| ||||||||||| | Sbjct 2066692 GTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAA 2066751 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 | | | ||||| || | || | | |||| | | ||| ||||||| | || Sbjct 2066752 CAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCC 2066811 Query 65601 ACATCGGTTTATCGTC-GACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GAT 65655 ||| | | | | ||||| | ||||| || | ||| || | || || Sbjct 2066812 ACAA-GTCTGAGGGAGTGACATTC------CACATGTCGTATTGAAGAATGCCTTGCGAC 2066864 Query 65656 ACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715 ||||| | | || | | | || || ||||| |||||| || |||| ||| Sbjct 2066865 ACTGGGCTG----CCTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGA 2066920 Query 65716 GGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTC 65775 | ||| || ||| || ||||||||||| || | ||| | || | ||||| Sbjct 2066921 AGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTC 2066980 Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835 ||| | || | || || | | || | |||||| |||||||||||||| | Sbjct 2066981 GGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAG 2067040 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGA 65894 ||||| ||| || || || || ||| | ||| ||| ||||| ||||||||||| |||| Sbjct 2067041 ACCGACGGGTCGGTGTCGGAAGTTGCT-CTTCTTCGCTTCAGGGACAGGGTAGTAGTTGA 2067099 Query 65895 TATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTC 65952 |||||||||| || | ||||| ||||| || || || | || | | | | Sbjct 2067100 TATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAGTGA--CCTCATGAAGACGACC 2067157 Query 65953 GAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAG 66012 ||| ||| | || | ||| | | | || || || | || || || || Sbjct 2067158 GAAGTCATA---TTCACCTCGAGCTTG---GTCG------ACGAATGTCGGGAGAGCCAG 2067205 Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 || || || ||||| ||||| | ||| || ||||| || || |||||||| || ||||| Sbjct 2067206 GGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCA 2067265 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 ||||| || || ||||| ||||| |||| || || ||||| | |||||| || || Sbjct 2067266 AAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTC 2067325 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||||| | ||| || || || || || || || | ||| | ||| || | ||| || Sbjct 2067326 CTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAG 2067385 Query 66193 AGCGCGTGCCTTCACCGTACGT-----ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247 | ||||| || || | || ||||| |||| || || ||||| Sbjct 2067386 TTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCT-CCTTC----TCATATCTCTCGTAT 2067440 Query 66248 AG-GTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 || | ||| ||| ||||| | || |||| || | || || || ||||| | Sbjct 2067441 AGAGCGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAA 2067499 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || | ||| || | || || ||||| ||| || | ||||| |||| | ||| Sbjct 2067500 GAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGC 2067559 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 |||||| | |||||||||| ||| || ||||||| || || | || || | || Sbjct 2067560 GTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAA 2067619 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 || || | ||| || |||||||| || ||||||||||| || | || || || Sbjct 2067620 GTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATT 2067679 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 |||||| || |||||||||||||| ||| |||||||| || | ||| || | ||||| Sbjct 2067680 GCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCC 2067739 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATT 66606 ||| || ||||||||||||| | ||| ||||||| || || || || |||| Sbjct 2067740 GTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATT 2067799 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAAT 66664 ||||||||||| || || ||||| ||||| |||||| || | |||| || Sbjct 2067800 GAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC--ATAT 2067857 Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 || || || ||| ||| | || ||| | | | | || || ||||| |||| Sbjct 2067858 ATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGA 2067917 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || || |||| ||| |||||||| | |||||| |||||| | | | |||||| | Sbjct 2067918 GGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGA 2067977 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCAT 66843 ||||||||||||||| | ||||| | |||| ||||| || | || |||| ||||| Sbjct 2067978 TTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACA-CGCAT 2068036 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 || | || ||| |||||||| | | ||| || | | | ||| || | || Sbjct 2068037 AAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 2068096 Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| ||||||| |||||| || ||| ||||| || Sbjct 2068097 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTC 2068132 >seq1 Length=8230860 Score = 114 bits (126), Expect = 1e-20 Identities = 339/507 (67%), Gaps = 27/507 (5%) Strand=Plus/Minus Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 ||||||||| |||||||||| |||||||| ||||||| || || || | | ||| | Sbjct 2004789 ATGGAGAATATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTATGTAAAGGACCCC 2004730 Query 61381 GCGGAACGTGAACG---AT-TGTTCAATGCCATCGAGACGATACCG-GCGGTGAAGCG-G 61434 || | ||| || ||||| | |||||||| || || || || | || | Sbjct 2004729 ----AAAGAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCATTC--GCAAG 2004676 Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGA 61491 ||||| || ||||| || | || |||| | ||| |||| | | | |||| ||||| Sbjct 2004675 AAAGCAGACTGGGCTCTGCGAT-GGAT-ATCAG-ACAAAGAGTCGAGCTTTGCCCAACGA 2004619 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 | |||| || || | ||||| || | || ||| |||||| ||||| | ||||| Sbjct 2004618 CTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTC 2004559 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| |||||| ||||| |||||||| || |||||| ||| ||| | || || || Sbjct 2004558 TGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGT 2004499 Query 61612 GACGAGGGCATGCATTGTGATTTTGC-TG--TTTTGCTATTCAAACGCTATCTGGTGAAT 61668 |||||||||||||| || ||||| || ||||| || ||| ||||| | | Sbjct 2004498 GACGAGGGCATGCACACGGACTTTGCGTGCCTTTTG--ATGCAA----CATCTGCAGCAC 2004445 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 ||| | | | | | ||| | || || || | |||||| ||||| Sbjct 2004444 AAGCCGGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAA 2004385 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || || || || || | |||||| |||| |||||||||| | || |||| ||| Sbjct 2004384 TTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAG 2004325 Query 61789 TATATTGAATTTGTTGCCGACCGTCTG 61815 || ||||| |||||||| ||||||||| Sbjct 2004324 TACATTGAGTTTGTTGCTGACCGTCTG 2004298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566657835280