Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq772 87.8 7e-15 >seq772 Length=74794 Score = 87.8 bits (96), Expect = 7e-15 Identities = 198/298 (66%), Gaps = 35/298 (12%) Strand=Plus/Minus Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||| | ||||| |||||||||||||| |||||||||||| |||||||| Sbjct 31314 TGGAAAGAGAGTTAGACAGCACATGAAATTGTTGAAA-GGAAGCGCTTGCGACCAGACTC 31256 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATC 274 ||| | | | | |||||| | | | |||| | | |||| || Sbjct 31255 GCCTGTGGGGGTTTAACCGGTACTTGTACTGGTGTA-TTTTCT-------------TAT- 31211 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 ||||| || ||||||| | | ||| ||| ||||| |||| || ||| Sbjct 31210 -----AGGCGGATGGTCAAAGGCCTCTGTAATATGGTACCCTTTGGGGTGTTTTA----- 31161 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAA 394 |||||| ||| | |||| || ||| ||||| ||| ||||||||| Sbjct 31160 -------CAATGCGATTAACCTAAATTGAGAAACGGGCTTCGGCTTAGATCCTGGCGTAA 31108 Query 395 TG-GTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGT 451 || ||| ||||||| || | ||| | || ||| ||| ||||||| |||||| | ||| Sbjct 31107 TGAGTTATAAGCGGACCAT-TTGAACCATAGACTAAGCAGTCTAATATCTATACAAGT 31051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079981917650