Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq578 206 2e-48 seq744 197 1e-45 seq657 167 2e-36 >seq578 Length=440600 Score = 206 bits (228), Expect = 2e-48 Identities = 418/614 (68%), Gaps = 6/614 (1%) Strand=Plus/Minus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| || |||||||||| |||||||| || ||||||| Sbjct 115926 TCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTG 115867 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||| || | ||||| || ||||| | ||| | ||||||||||||||||| ||||| Sbjct 115866 ACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAG 115807 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || ||||||||||| ||||| | || || ||| || || ||||| ||||| | Sbjct 115806 GGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTT 115747 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || |||||||| || || | ||| || || |||||||| || | || || || || Sbjct 115746 GCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCA 115687 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| || ||| || || ||| ||| || || |||||||||||||| || ||| Sbjct 115686 CCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGTC 115627 Query 66629 TTCGAGATGGCAGCACAA-TCGGCCA-CTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || ||||| |||||| || | | |||| | || || |||||| ||| ||| Sbjct 115626 TTGGAGATCATGGCACAAGTCTTCAAGGTGTC--ATAGATACCCTCAATGCTGTCCTCCT 115569 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || | ||| |||| || || || || | || || |||| ||| || | Sbjct 115568 TCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAG 115509 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| || ||||| | | ||||| |||||| |||||||| || | Sbjct 115508 TCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCT 115449 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 | | || || || || || |||| ||| ||||| | | || ||||| || || | Sbjct 115448 CGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTC-A 115390 Query 66867 CCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 || || ||| ||||| | | | || || |||||||| ||||||| || ||||| Sbjct 115389 GCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTAT 115330 Query 66926 GAGTAATTGAAATC 66939 ||| |||||||| Sbjct 115329 TGGTAGTTGAAATC 115316 Score = 113 bits (124), Expect = 4e-20 Identities = 314/475 (66%), Gaps = 10/475 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | | || ||| ||| | || | ||| ||||||||||||||| Sbjct 117214 TCGACGGTGAACTGAATAGGAGCAGAAGCAGCCATAGTGCGAAGGTAGTACATGCCGGTC 117155 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || || ||| || ||| ||||| || | || |||| | | | ||||| Sbjct 117154 TTCAGACCCATCTTCCATCCAGCGAAGTGCATAC-TGGTGATCTTGCCCATAGTAGGCTC 117096 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | |||||| ||| || ||||| ||||| ||||||||||| Sbjct 117095 CCTCATGTGGATGTTAAGGGACTGAGACTGGTCAATGTACGCGCCACGGTCTGCAGCCAT 117036 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312 | || ||| ||| || || ||||| || ||||||||||| || || || | Sbjct 117035 CTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGAGCCTTGATGT-CGG 116977 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || ||||| | |||| |||||| ||||| | ||||| || || || || Sbjct 116976 CA---GGAATGTTGGGGATGTTCTGGACGGAACCTCCCTCGGCAATGATACGGTTCTTCA 116920 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || |||||||| || | |||| |||| | | || | | || | ||| | Sbjct 116919 TGTTGTCAGACCACAAGCCGAGGTCGACGAGATCCTTCAGCAGCCAAGGGTTAACGACCT 116860 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||| || | || |||||||| |||||||| || ||| ||||| ||| ||| Sbjct 116859 GGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGTTCGAAGCATT 116800 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | || ||| || || || ||| || || ||||||||||| || | ||| Sbjct 116799 CGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACGAGCAA 116745 Score = 105 bits (116), Expect = 5e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| || |||||||| || | |||||| || || | ||| || || || || ||||||| Sbjct 116310 TGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGA 116251 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 || || ||||| || ||| || ||| || || |||| |||| || || ||||| Sbjct 116250 TGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCT 116191 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 ||||| ||||||||||||| |||| | || | |||||||| |||| ||| | | Sbjct 116190 TGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAA 116131 Query 66180 TGGCGTGCCAAAG 66192 |||| | ||| || Sbjct 116130 TGGCATACCAGAG 116118 >seq744 Length=38458 Score = 197 bits (218), Expect = 1e-45 Identities = 353/510 (69%), Gaps = 8/510 (2%) Strand=Plus/Minus Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494 || || |||||||||||||| ||||| || || |||| | | |||| ||| || | Sbjct 31035 AAGGCTGATTGGGCCTTCAAGTGGATTTCCTCTA--ACGGTT-CTTTTGCTGAGCGTCTT 30979 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||| | ||||| ||| | || ||| ||| || ||||| | || |||||| Sbjct 30978 GTTGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGG 30919 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 | ||||||||||| | ||||| ||| |||| ||||||||||| ||||| | || || Sbjct 30918 CTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGAT 30859 Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 || ||| | ||| ||| |||||| | | |||| | | |||| || ||||| Sbjct 30858 GAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCC---ATCTTCGTAAGCGTCCT 30802 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || || || || || | || || || | || |||||||||||| || Sbjct 30801 AGCCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTG 30742 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||||| | |||||||||||||||| || | |||| || || || Sbjct 30741 ACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATC 30682 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAA 61853 ||||| ||||| || ||||| |||| | | |||| | || | ||| || | | | Sbjct 30681 GAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTG-ACAAGATTTACATGGCTAC 30623 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 || |||||||| || ||||||||||| || || | |||||||| || || || || || Sbjct 30622 CAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563 Query 61914 ACGTGTAGGCGACTATCAACGTTTGGGTGT 61943 ||||| |||||||||||| ||||| Sbjct 30562 GCGTGTCTCTGACTATCAACGTGCTGGTGT 30533 >seq657 Length=446211 Score = 167 bits (184), Expect = 2e-36 Identities = 303/443 (68%), Gaps = 3/443 (1%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 || ||| | || || || | || |||||| | || ||| ||| || || ||| | ||| Sbjct 212223 CGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATC 212164 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| ||||||| ||||| || ||||| |||||||||||| || ||| |||| || Sbjct 212163 TTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCT 212104 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 || || ||||| |||| || || ||| | |||| ||| | | ||| || Sbjct 212103 CGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCAC---CTGAACAAC 212047 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 || || || ||| ||| | |||| | ||| || || || || ||||| Sbjct 212046 CGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAG 211987 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || ||||| ||||| | ||||| | ||| | || ||||| | || |||| ||| Sbjct 211986 TTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAG 211927 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || || ||||||||||| ||| ||||| | | || | ||| | ||| || Sbjct 211926 TACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACAAC 211867 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 | | |||||| || || |||||||||| || ||||| | ||||||||| || || ||| Sbjct 211866 GCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTC 211807 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| ||||| || ||||| || Sbjct 211806 GAGAAGCGTGTCGGTGACTACCA 211784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563915361520