Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq578 206 2e-48
seq744 197 1e-45
seq657 167 2e-36
>seq578
Length=440600
Score = 206 bits (228), Expect = 2e-48
Identities = 418/614 (68%), Gaps = 6/614 (1%)
Strand=Plus/Minus
Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388
|| ||||| ||| || ||||| || |||||||||| |||||||| || |||||||
Sbjct 115926 TCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTG 115867
Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448
||| || | ||||| || ||||| | ||| | ||||||||||||||||| |||||
Sbjct 115866 ACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAG 115807
Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508
|| ||||||||||| ||||| | || || ||| || || ||||| ||||| |
Sbjct 115806 GGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTT 115747
Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568
|| |||||||| || || | ||| || || |||||||| || | || || || ||
Sbjct 115746 GCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCA 115687
Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628
||||| || ||| || || ||| ||| || || |||||||||||||| || |||
Sbjct 115686 CCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGTC 115627
Query 66629 TTCGAGATGGCAGCACAA-TCGGCCA-CTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686
|| ||||| |||||| || | | |||| | || || |||||| ||| |||
Sbjct 115626 TTGGAGATCATGGCACAAGTCTTCAAGGTGTC--ATAGATACCCTCAATGCTGTCCTCCT 115569
Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746
| || | ||| |||| || || || || | || || |||| ||| || |
Sbjct 115568 TCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAG 115509
Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806
| || | ||||| || ||||| | | ||||| |||||| |||||||| || |
Sbjct 115508 TCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCT 115449
Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866
| | || || || || || |||| ||| ||||| | | || ||||| || || |
Sbjct 115448 CGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTC-A 115390
Query 66867 CCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925
|| || ||| ||||| | | | || || |||||||| ||||||| || |||||
Sbjct 115389 GCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTAT 115330
Query 66926 GAGTAATTGAAATC 66939
||| ||||||||
Sbjct 115329 TGGTAGTTGAAATC 115316
Score = 113 bits (124), Expect = 4e-20
Identities = 314/475 (66%), Gaps = 10/475 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | || ||| ||| | || | ||| |||||||||||||||
Sbjct 117214 TCGACGGTGAACTGAATAGGAGCAGAAGCAGCCATAGTGCGAAGGTAGTACATGCCGGTC 117155
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196
|| || || ||| || ||| ||||| || | || |||| | | | |||||
Sbjct 117154 TTCAGACCCATCTTCCATCCAGCGAAGTGCATAC-TGGTGATCTTGCCCATAGTAGGCTC 117096
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | |||||| ||| || ||||| ||||| |||||||||||
Sbjct 117095 CCTCATGTGGATGTTAAGGGACTGAGACTGGTCAATGTACGCGCCACGGTCTGCAGCCAT 117036
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312
| || ||| ||| || || ||||| || ||||||||||| || || || |
Sbjct 117035 CTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGAGCCTTGATGT-CGG 116977
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
|| ||||| | |||| |||||| ||||| | ||||| || || || ||
Sbjct 116976 CA---GGAATGTTGGGGATGTTCTGGACGGAACCTCCCTCGGCAATGATACGGTTCTTCA 116920
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| || |||||||| || | |||| |||| | | || | | || | ||| |
Sbjct 116919 TGTTGTCAGACCACAAGCCGAGGTCGACGAGATCCTTCAGCAGCCAAGGGTTAACGACCT 116860
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
||||||| || | || |||||||| |||||||| || ||| ||||| ||| |||
Sbjct 116859 GGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGTTCGAAGCATT 116800
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547
| || ||| || || || ||| || || ||||||||||| || | |||
Sbjct 116799 CGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACGAGCAA 116745
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059
|||| || |||||||| || | |||||| || || | ||| || || || || |||||||
Sbjct 116310 TGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGA 116251
Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
|| || ||||| || ||| || ||| || || |||| |||| || || |||||
Sbjct 116250 TGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCT 116191
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
||||| ||||||||||||| |||| | || | |||||||| |||| ||| | |
Sbjct 116190 TGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAA 116131
Query 66180 TGGCGTGCCAAAG 66192
|||| | ||| ||
Sbjct 116130 TGGCATACCAGAG 116118
>seq744
Length=38458
Score = 197 bits (218), Expect = 1e-45
Identities = 353/510 (69%), Gaps = 8/510 (2%)
Strand=Plus/Minus
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| || |||||||||||||| ||||| || || |||| | | |||| ||| || |
Sbjct 31035 AAGGCTGATTGGGCCTTCAAGTGGATTTCCTCTA--ACGGTT-CTTTTGCTGAGCGTCTT 30979
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || ||||| | ||||| ||| | || ||| ||| || ||||| | || ||||||
Sbjct 30978 GTTGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGG 30919
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614
| ||||||||||| | ||||| ||| |||| ||||||||||| ||||| | || ||
Sbjct 30918 CTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGAT 30859
Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674
|| ||| | ||| ||| |||||| | | |||| | | |||| || |||||
Sbjct 30858 GAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCC---ATCTTCGTAAGCGTCCT 30802
Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734
| || || || || || | || || || | || |||||||||||| ||
Sbjct 30801 AGCCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTG 30742
Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794
|| || ||| | ||||| | |||||||||||||||| || | |||| || || ||
Sbjct 30741 ACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATC 30682
Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAA 61853
||||| ||||| || ||||| |||| | | |||| | || | ||| || | | |
Sbjct 30681 GAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTG-ACAAGATTTACATGGCTAC 30623
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| |||||||| || ||||||||||| || || | |||||||| || || || || ||
Sbjct 30622 CAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563
Query 61914 ACGTGTAGGCGACTATCAACGTTTGGGTGT 61943
||||| |||||||||||| |||||
Sbjct 30562 GCGTGTCTCTGACTATCAACGTGCTGGTGT 30533
>seq657
Length=446211
Score = 167 bits (184), Expect = 2e-36
Identities = 303/443 (68%), Gaps = 3/443 (1%)
Strand=Plus/Minus
Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548
|| ||| | || || || | || |||||| | || ||| ||| || || ||| | |||
Sbjct 212223 CGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATC 212164
Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608
|| ||| ||||||| ||||| || ||||| |||||||||||| || ||| |||| ||
Sbjct 212163 TTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCT 212104
Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668
|| || ||||| |||| || || ||| | |||| ||| | | ||| ||
Sbjct 212103 CGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCAC---CTGAACAAC 212047
Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728
|| || || ||| ||| | |||| | ||| || || || || |||||
Sbjct 212046 CGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAG 211987
Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788
|| ||||| ||||| | ||||| | ||| | || ||||| | || |||| |||
Sbjct 211986 TTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAG 211927
Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848
|| || || || ||||||||||| ||| ||||| | | || | ||| | ||| ||
Sbjct 211926 TACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACAAC 211867
Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908
| | |||||| || || |||||||||| || ||||| | ||||||||| || || |||
Sbjct 211866 GCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTC 211807
Query 61909 GAGAAACGTGTAGGCGACTATCA 61931
||||| ||||| || ||||| ||
Sbjct 211806 GAGAAGCGTGTCGGTGACTACCA 211784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563915361520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |