Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq64 89.7 2e-13 seq475 80.6 8e-11 >seq64 Length=21045 Score = 89.7 bits (98), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||| ||||||||| | ||||| |||||| ||| |||| | Sbjct 14143 GTTTCCCACCGTTCTGGTGAGACTGAAGATACCACAATTGCTGATCTTGTTGTTGGTCTT 14202 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | |||||||| ||||| ||| || |||| | | ||| ||| | ||||| | Sbjct 14203 CGTACCGGTCAAATCAAGACTGGTGCTCCTTGTA--GAAGTGAGCGTTTGGCTAAGCTTA 14260 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 14261 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 14292 >seq475 Length=36660 Score = 80.6 bits (88), Expect = 8e-11 Identities = 112/155 (72%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTG--CAA 2830 || || ||| | || ||||||||||||||| | || || |||||| ||| || | | Sbjct 18062 GTCTCTCACAGATCTGGTGAAACTGAAGATACTACCATTGCTGATCTTGTCGTCGGTCTC 18003 Query 2831 CTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | | |||||||||| ||||| ||| | | ||| |||| ||| |||| || |||| Sbjct 18002 CGTA--CTGGTCAAATCAAGACTGGTGCCCCTTGCCGTTCTGAACGTCTTGCCAAGTACA 17945 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGTGAA 2925 ||||| | || ||||| ||||| || | |||||| Sbjct 17944 ACCAACTTCTCCGTATTGAAGAAGAATTGGGTGAA 17910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156036837958092