Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq222 715 0.0 >seq222 Length=38987 Score = 715 bits (792), Expect = 0.0 Identities = 560/658 (85%), Gaps = 12/658 (2%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 35404 AGCTCCTTCGACGAGTCGAGTTGTTTAGGAATGTAGCTCTAAATGGGAGGTAAATTTCTT 35345 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 35344 CTAAAGCTAAATATTGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 35285 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||| |||||||||||||||||||||||||||| || ||||||||| | ||||||| Sbjct 35284 AGCACTTTAGAAAGAGAGTTAAAAAGCACGTGAAATTATTAAAAGGGAAGGGATTGCAAC 35225 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGG 266 ||||||||| ||| | || || |||| | ||||| |||| | ||| | |||| Sbjct 35224 CAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTAACCGGTTTACTC-GCCGCGTTGCAGG 35167 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 | |||||| || | || | ||| ||| | |||||||||| |||| ||| ||| Sbjct 35166 CTAGCATCGTCTGGTGCCGCTAGAT-AAGACTAGAGGAATGTGGCTCCCT--CGGGAGTG 35110 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| || ||||| || || | || | |||||||||||| ||||||||||| Sbjct 35109 TTATAGCCTCTAGT--AATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATG 35053 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 || ||||||| || |||| | ||||||||| ||||||||| ||||||||||| |||||| Sbjct 35052 CTAGCGTAATAGTCGTAATCCGCCCGTCTTAAAACACGGACTAAGGAGTCTAATATCTAT 34993 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||| || |||||| |||||| | ||||||||||||||||||||||||| ||||| Sbjct 34992 GCGAGTATTCGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACC--G 34935 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 | |||||| |||||||||||||| |||||||||||||||||| |||| || |||||| Sbjct 34934 CAAGGTGCATCATCGACCGATCCTAATGTCTTCGGATGGATTTAAGTATAAGTATAGCTA 34875 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||||||||||| || |||||||||| ||||||||||||| |||||||||||| || Sbjct 34874 TTAGGACCCGAAAGATAGTAAACTATGCCTAAATAGGGTGAAGCTAGAGGAAACTCTAGT 34815 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 34814 AGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 34757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079979429450