Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq222 280 2e-73 seq893 96.9 6e-18 >seq222 Length=38987 Score = 280 bits (310), Expect = 2e-73 Identities = 217/257 (84%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| | |||| | |||||||||||||||||||| ||||||||||||||||| | ||| Sbjct 36439 ACTCGTTAGCTCTATTAGTGTAGCGCGCGTGCGGCCTAGAACATCTAAGGGCATTATAGA 36498 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||| ||||||||||||||||| || |||| ||||| ||||||||||||||||||| || Sbjct 36499 CCTATTATTGCCTCAAACTTCTATCGGCTT-AAGCCGATAGTCCCTCTAAGAAGCCGGCG 36557 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || | |||||||||||||||||||||||||||||||||| |||||| Sbjct 36558 ACCCGCTAAAGCGGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 36617 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||| |||| || ||||||||||||| || || |||||||||| ||| ||||| Sbjct 36618 GCAGACAAATTACTCTACTAACTAAGAACGGCTATATACTACCACCCATAAAATTAAGAA 36677 Query 242 AGAGCTATCAATCTGTC 258 |||||| ||||||| || Sbjct 36678 AGAGCTCTCAATCTATC 36694 >seq893 Length=89317 Score = 96.9 bits (106), Expect = 6e-18 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 140 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 199 ||| ||||||||||| || |||||||| |||||| |||||| |||||| ||||| || Sbjct 41624 GGCCATTTAGCAGGTCAAACTCTCGTTCATTATCGCAATTAAGCAGACATATCACATCAT 41683 Query 200 CAACTAAGAACGGCCATGCACCA 222 |||| |||||||||||||||||| Sbjct 41684 CAACCAAGAACGGCCATGCACCA 41706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792597479