Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq222 695 0.0 >seq222 Length=38987 Score = 695 bits (770), Expect = 0.0 Identities = 476/536 (89%), Gaps = 3/536 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 32997 CTTTTGCTCTACTAGAGATTTCTGTTCTCTATGAGTCCCCCTTAGGACACCTGCGTTATG 33056 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||| |||||||||||||||||||||||||| | ||||| || |||||||||| Sbjct 33057 GTTTAACAGATATGCCGCCCCAGCCAAACTCCCCACCTAATAATGTTATTAACCCGGATC 33116 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||| |||| |||||||||||| | ||||| |||||||||| ||| | Sbjct 33117 AGCCCGCGAAGGACTTTAATATAAGAAAATGGTCGATAAAGACTAGTTCCGCTTAATTAA 33176 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||||||||||| ||||||||| |||||||| ||||| || || Sbjct 33177 TTAAGTAAAAAAACGATAAGGGTAGTAGTATTTCACCGGCGCCGAA---GCTCCTACCTA 33233 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| |||||||| |||||||| ||||||||| Sbjct 33234 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTTAAGCTCAATAGGGTCTTC 33293 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| || |||||||||||||| ||| | |||||||||||||||||||| Sbjct 33294 TTTCCCCGCTGATTTTGCGAAGCCCGTTCCCTTCGCTATAGTTTCGCTAGATAGTAGATA 33353 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||| ||||||||||||||| ||| || ||||||||||||||||| |||||||||| Sbjct 33354 GGGATAGTAGGAATCTCGTTAATCTATTTATACGCGTCACTAATTAGATAACGAGGCATT 33413 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 33414 TAGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAGTTGAATTTCT 33473 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 | ||||||| ||| |||||||| || |||||||||||||||| || | || ||||| Sbjct 33474 TTACTTTGATATTTAGAGCACTAGGTAGAAATCACATTGCGTTAATACCATTTTCT 33529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635184318432