Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq222 239 7e-61
>seq222
Length=38987
Score = 239 bits (264), Expect = 7e-61
Identities = 223/278 (80%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| || |||
Sbjct 32673 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGTAGT 32616
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||| ||||||| ||| || ||| ||||||||||||| ||||||||||| |
Sbjct 32615 ACCGCGAAGCTACTATCTGCTAGATAATAGCTAAACGCCTCTAAGTTAGAATCCATGCTA 32556
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
|||||||| |||| |||| |||| ||||| |||||||||||||||||||||||| ||
Sbjct 32555 GAACGGGGCGATTTTCTCTAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 32496
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
||||| ||| ||| || || |||| || | | | | || ||||| |||
Sbjct 32495 CTTAGTAGG-GTATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGCCGGATAGCA 32438
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| | |||| |||| |||||||||||||||||
Sbjct 32437 ATTTAATAGCGCGCTAGGATGAATCCTTTGCAGACGAC 32400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192389376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |