Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq222 239 7e-61 >seq222 Length=38987 Score = 239 bits (264), Expect = 7e-61 Identities = 223/278 (80%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| || ||| Sbjct 32673 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGTAGT 32616 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||| ||||||| ||| || ||| ||||||||||||| ||||||||||| | Sbjct 32615 ACCGCGAAGCTACTATCTGCTAGATAATAGCTAAACGCCTCTAAGTTAGAATCCATGCTA 32556 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 |||||||| |||| |||| |||| ||||| |||||||||||||||||||||||| || Sbjct 32555 GAACGGGGCGATTTTCTCTAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 32496 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240 ||||| ||| ||| || || |||| || | | | | || ||||| ||| Sbjct 32495 CTTAGTAGG-GTATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGCCGGATAGCA 32438 Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| | |||| |||| ||||||||||||||||| Sbjct 32437 ATTTAATAGCGCGCTAGGATGAATCCTTTGCAGACGAC 32400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192389376