Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq90 98.7 4e-18 seq101 93.3 2e-16 >seq90 Length=369286 Score = 98.7 bits (108), Expect = 4e-18 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||| Sbjct 122660 GAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCGAATCGATCGTCAAGTTTGG 122601 Query 672 GTATAGG 678 | ||||| Sbjct 122600 GCATAGG 122594 >seq101 Length=363274 Score = 93.3 bits (102), Expect = 2e-16 Identities = 61/66 (92%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 |||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||| Sbjct 150318 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC-GACGTGCTAATCGATCATCAA 150260 Query 666 ATTTGG 671 ||| || Sbjct 150259 ATTCGG 150254 Score = 75.2 bits (82), Expect = 5e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||||||||| || |||||||||||| ||||||||||||||||||||||| ||| Sbjct 148748 GGTGGAGGCCCGAAGCGGTTCTGGCAGGCAAATCGATCGTCAAATTTGGGCATA 148695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079983676550