Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq690 320 3e-85 >seq690 Length=197326 Score = 320 bits (354), Expect = 3e-85 Identities = 246/281 (88%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 196310 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 196253 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 196252 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 196193 Query 121 GAACGGGGTGATTCTCT-CCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| |||||||| ||| ||||||||| | ||||||||| ||||||||||||||| ||| Sbjct 196192 GAAAGGGGTGATA-TCTGCCTGCACATTGATGTCGGATACAAATAGGCTTCGGCCCAGAA 196134 Query 180 CCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 ||| | |||| | ||||||| || | || |||| |||| | | |||||||| |||| Sbjct 196133 CCTCACCAGGTCAGCAACGGCGCCT-CCATGGAAATTGGGGGTG-TTAGCTGGCGTATTG 196076 Query 239 CAATTTCACCAT-GCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| || || ||||||| | ||||||||||||||||| Sbjct 196075 CAATTTTACAATGGCGCAGGATTGAATCCTTTGCAGACGAC 196035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193960704