Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq634 349 3e-91 seq46 154 1e-32 >seq634 Length=211807 Score = 349 bits (386), Expect = 3e-91 Identities = 1231/1897 (65%), Gaps = 52/1897 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| || || | | || || ||| | || | || ||||| | ||||||| Sbjct 36207 TCGACGGTGAATTGAATAGGAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGCCGGTC 36266 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| ||| | ||| |||||||||| |||| |||| | | ||||| Sbjct 36267 TTGAGACCAAGCTTCCATCCGGCGAAGTGCATCGATG-TAATCTTGCCCATGGTAGGCTC 36325 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | |||||| |||||||||| | ||||| || || ||||| Sbjct 36326 CTTCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCAT 36385 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | |||||| ||| || || ||||| ||||||||||| || || | | | ||| Sbjct 36386 CTGAATGATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAG-CGCCTTGATTTCAT 36444 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| | ||| ||||| ||||||| | || || ||||| || ||| Sbjct 36445 CGGGAATGTTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGT 36504 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGACT 65431 || ||||||| |||| || | | || | || ||| | | |||| ||| Sbjct 36505 TGTCAGACCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGG----TTGACGACC 36560 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||||| || ||||| ||| ||||||||||| || ||||| ||| || Sbjct 36561 TGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCAT 36620 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 ||| ||| ||| |||||||||| || || ||||| |||||||| || || | || ||| Sbjct 36621 TCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAG 36680 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATT-CGTCCCAGTTCCACA--TCGGT 65608 || || | || | | | | || || || | | | ||||||| ||| | ||||| Sbjct 36681 TTGCGAACACCATGCTGTGCGATCTT-TGCCTTGAGAGCATCCCAGTCCCAGAGGTCGGT 36739 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 ||| || || | |||||||| | ||| || | || | | || || Sbjct 36740 GGG-CGT-GATATTC------CACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAG 36791 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGC 65727 || | || | || || || |||||||| || | || | | | | ||| || Sbjct 36792 CCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGT-GAGAGC 36850 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || || |||||||| || || | || || | | ||| || ||| | Sbjct 36851 AGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAA 36910 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 |||| | || || || | || || ||||| || ||||||| ||||| || | Sbjct 36911 GGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCT 36970 Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907 || | || ||| | || ||||| || ||||||| ||||| |||||||| Sbjct 36971 GTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTT 37030 Query 65908 ATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTT 65966 |||| ||| || || || || || |||| | ||| | || | ||||||| | | Sbjct 37031 GTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGCTTCTG-GAAATCATACTCGC 37089 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | | ||| | | |||| || || || ||||| || || | ||||| Sbjct 37090 CACGT----------TGCATGTC--CACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGC 37137 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 |||| || | ||| || || ||||| ||||| | || |||||||| || ||| || || Sbjct 37138 AGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGC 37197 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 | || || || | |||| || || || ||||| ||||||||||||||||| | ||| | Sbjct 37198 GAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGAGCATAT 37257 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 |||| | || ||||| |||| ||| | |||||||| ||| || | || || Sbjct 37258 ACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCTGGGCGCGCA 37317 Query 66207 CCGTA---CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | || ||| |||| | ||| || | | || | | || || | ||||| | Sbjct 37318 CAGTCTCTCGT-CCGCG-TCCCTCGGCCT-CATACTTGTGATACAGCTCCTCGAACTCGT 37374 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | || | || |||| || | || | || || || | || | ||| || |||| Sbjct 37375 CGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCAT 37434 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 | | || || ||| || || ||||| ||||| || |||||||| | ||| || | Sbjct 37435 TATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGG 37494 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || ||| || |||| || || ||||| | || ||||| |||||| ||||| | Sbjct 37495 CGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGT 37554 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 ||||||| || |||||||||||||| | || || || |||||| |||||||| | Sbjct 37555 GCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACAT 37614 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 | |||||| ||||| ||||||| | ||| || | ||| ||||| || | || || | Sbjct 37615 AACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCG 37674 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | || ||||| || || || || || |||||||| ||||||||||| || | Sbjct 37675 TTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACCAATACCGCCAG 37734 Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTC 66681 | ||||| ||||| ||| || || | || || | | ||||| || ||| ||| Sbjct 37735 CGGTCTTGGAGATCATAGCGCA--CGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTC 37792 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 | ||||||| | |||| |||| || | || || |||||||| |||| ||| Sbjct 37793 ATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAA 37852 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 || || || | ||||| || ||||| | | |||||||| ||||| ||||||||| | Sbjct 37853 AAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAGTTGTATGTCTCGATGGC 37912 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCC 66860 || |||| |||||| || || || | || ||| ||||| || | || ||| || | Sbjct 37913 CTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACA-CGCATGAGCATGTGTTGTGGAC 37971 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | || | | | | || || | | | || ||||||||||||||||| | |||| Sbjct 37972 GCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAA 38031 Query 66921 AGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 || || ||| ||||| ||| | | | |||||| || Sbjct 38032 AGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGC 38068 >seq46 Length=404262 Score = 154 bits (170), Expect = 1e-32 Identities = 216/297 (73%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| || || ||||| | || ||| ||||| | Sbjct 337182 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTTTGGACCGCCGAAGAGATCGATCTC 337241 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||| | | |||||| | ||| || | ||| || || | ||||| Sbjct 337242 TCCAAAGACCTCCACGACTGGAACAAGCGATTGAACGA-CGACGAGCGCTTCTTCATCTC 337300 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || ||||| |||||||| ||||| | | || || Sbjct 337301 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTGGTCGAGCG 337360 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| ||| || ||||||||||| | |||||||| || ||||||||||||||||| | Sbjct 337361 CTTTAGCGGAG-AGGTGCAAGTGCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGA 337419 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||| | ||| | | |||||||| |||||||| |||| Sbjct 337420 TGGAGAACATCCACTCGGAAACATACTCGCTCTTGATCGATACCTACATCAGCGAGC 337476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564312681040