Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq634 349 3e-91
seq46 154 1e-32
>seq634
Length=211807
Score = 349 bits (386), Expect = 3e-91
Identities = 1231/1897 (65%), Gaps = 52/1897 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||| || || | | || || ||| | || | || ||||| | |||||||
Sbjct 36207 TCGACGGTGAATTGAATAGGAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGCCGGTC 36266
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| | ||| |||||||||| |||| |||| | | |||||
Sbjct 36267 TTGAGACCAAGCTTCCATCCGGCGAAGTGCATCGATG-TAATCTTGCCCATGGTAGGCTC 36325
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | |||||| |||||||||| | ||||| || || |||||
Sbjct 36326 CTTCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCAT 36385
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315
| |||||| ||| || || ||||| ||||||||||| || || | | | |||
Sbjct 36386 CTGAATGATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAG-CGCCTTGATTTCAT 36444
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375
||||| | ||| ||||| ||||||| | || || ||||| || |||
Sbjct 36445 CGGGAATGTTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGT 36504
Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGACT 65431
|| ||||||| |||| || | | || | || ||| | | |||| |||
Sbjct 36505 TGTCAGACCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGG----TTGACGACC 36560
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||||| || ||||| ||| ||||||||||| || ||||| ||| ||
Sbjct 36561 TGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCAT 36620
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
||| ||| ||| |||||||||| || || ||||| |||||||| || || | || |||
Sbjct 36621 TCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAG 36680
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATT-CGTCCCAGTTCCACA--TCGGT 65608
|| || | || | | | | || || || | | | ||||||| ||| | |||||
Sbjct 36681 TTGCGAACACCATGCTGTGCGATCTT-TGCCTTGAGAGCATCCCAGTCCCAGAGGTCGGT 36739
Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668
||| || || | |||||||| | ||| || | || | | || ||
Sbjct 36740 GGG-CGT-GATATTC------CACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAG 36791
Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGC 65727
|| | || | || || || |||||||| || | || | | | | ||| ||
Sbjct 36792 CCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGT-GAGAGC 36850
Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787
|| || |||||||| || || | || || | | ||| || ||| |
Sbjct 36851 AGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAA 36910
Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847
|||| | || || || | || || ||||| || ||||||| ||||| || |
Sbjct 36911 GGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCT 36970
Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907
|| | || ||| | || ||||| || ||||||| ||||| ||||||||
Sbjct 36971 GTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTT 37030
Query 65908 ATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTT 65966
|||| ||| || || || || || |||| | ||| | || | ||||||| | |
Sbjct 37031 GTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGCTTCTG-GAAATCATACTCGC 37089
Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026
| | ||| | | |||| || || || ||||| || || | |||||
Sbjct 37090 CACGT----------TGCATGTC--CACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGC 37137
Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086
|||| || | ||| || || ||||| ||||| | || |||||||| || ||| || ||
Sbjct 37138 AGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGC 37197
Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146
| || || || | |||| || || || ||||| ||||||||||||||||| | ||| |
Sbjct 37198 GAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGAGCATAT 37257
Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206
|||| | || ||||| |||| ||| | |||||||| ||| || | || ||
Sbjct 37258 ACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCTGGGCGCGCA 37317
Query 66207 CCGTA---CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263
| || ||| |||| | ||| || | | || | | || || | ||||| |
Sbjct 37318 CAGTCTCTCGT-CCGCG-TCCCTCGGCCT-CATACTTGTGATACAGCTCCTCGAACTCGT 37374
Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323
| || | || |||| || | || | || || || | || | ||| || ||||
Sbjct 37375 CGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCAT 37434
Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383
| | || || ||| || || ||||| ||||| || |||||||| | ||| || |
Sbjct 37435 TATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGG 37494
Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443
| || ||| || |||| || || ||||| | || ||||| |||||| ||||| |
Sbjct 37495 CGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGT 37554
Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503
||||||| || |||||||||||||| | || || || |||||| |||||||| |
Sbjct 37555 GCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACAT 37614
Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563
| |||||| ||||| ||||||| | ||| || | ||| ||||| || | || || |
Sbjct 37615 AACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCG 37674
Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623
| || ||||| || || || || || |||||||| ||||||||||| || |
Sbjct 37675 TTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACCAATACCGCCAG 37734
Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTC 66681
| ||||| ||||| ||| || || | || || | | ||||| || ||| |||
Sbjct 37735 CGGTCTTGGAGATCATAGCGCA--CGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTC 37792
Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741
| ||||||| | |||| |||| || | || || |||||||| |||| |||
Sbjct 37793 ATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAA 37852
Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801
|| || || | ||||| || ||||| | | |||||||| ||||| ||||||||| |
Sbjct 37853 AAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAGTTGTATGTCTCGATGGC 37912
Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCC 66860
|| |||| |||||| || || || | || ||| ||||| || | || ||| || |
Sbjct 37913 CTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACA-CGCATGAGCATGTGTTGTGGAC 37971
Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920
| || | | | | || || | | | || ||||||||||||||||| | ||||
Sbjct 37972 GCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAA 38031
Query 66921 AGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957
|| || ||| ||||| ||| | | | |||||| ||
Sbjct 38032 AGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGC 38068
>seq46
Length=404262
Score = 154 bits (170), Expect = 1e-32
Identities = 216/297 (73%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| ||||| || || ||||| | || ||| ||||| |
Sbjct 337182 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTTTGGACCGCCGAAGAGATCGATCTC 337241
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||||||| | | |||||| | ||| || | ||| || || | |||||
Sbjct 337242 TCCAAAGACCTCCACGACTGGAACAAGCGATTGAACGA-CGACGAGCGCTTCTTCATCTC 337300
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||| ||||| || ||||| |||||||| ||||| | | || ||
Sbjct 337301 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTGGTCGAGCG 337360
Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| || ||||||||||| | |||||||| || ||||||||||||||||| |
Sbjct 337361 CTTTAGCGGAG-AGGTGCAAGTGCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGA 337419
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| |||||||||| | ||| | | |||||||| |||||||| ||||
Sbjct 337420 TGGAGAACATCCACTCGGAAACATACTCGCTCTTGATCGATACCTACATCAGCGAGC 337476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564312681040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |