Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq431 212 9e-53
seq166 147 3e-33
seq247 95.1 2e-17
>seq431
Length=261634
Score = 212 bits (234), Expect = 9e-53
Identities = 176/210 (84%), Gaps = 9/210 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAG----TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAA 56
|||||| ||||||||||||| ||||||| |||| ||||||| ||||||||||| |
Sbjct 253398 GTACAAGGGGCAGGGACGTACCTAATCAACGCAAGCT-GATGACTTACGCTTACTAGGGA 253340
Query 57 TTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AA 115
|| |||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||
Sbjct 253339 TT-CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAA 253281
Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175
|||||||| | ||| |||||||||| || |||| || | | |||||||||||||||
Sbjct 253280 GATTACCCAGGCCTTTCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCG 253223
Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||||||
Sbjct 253222 TGCGGCCCAGAACATCTAAGGGCATCACAG 253193
>seq166
Length=529
Score = 147 bits (162), Expect = 3e-33
Identities = 102/115 (89%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173
|||||||||| | ||| |||||||||| || |||| || | | |||||||||||||
Sbjct 522 AAGATTACCCAGGCCTTTCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCG 465
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 464 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 410
>seq247
Length=574
Score = 95.1 bits (104), Expect = 2e-17
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||||| |||||||||||| | |||
Sbjct 504 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGGA-TTC 561
Query 61 CTCGTTGAAGA 71
|||||||||||
Sbjct 562 CTCGTTGAAGA 572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996539625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |