Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq431 212 9e-53 seq166 147 3e-33 seq247 95.1 2e-17 >seq431 Length=261634 Score = 212 bits (234), Expect = 9e-53 Identities = 176/210 (84%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAG----TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAA 56 |||||| ||||||||||||| ||||||| |||| ||||||| ||||||||||| | Sbjct 253398 GTACAAGGGGCAGGGACGTACCTAATCAACGCAAGCT-GATGACTTACGCTTACTAGGGA 253340 Query 57 TTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AA 115 || |||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | || Sbjct 253339 TT-CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAA 253281 Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||||| | ||| |||||||||| || |||| || | | ||||||||||||||| Sbjct 253280 GATTACCCAGGCCTTTCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCG 253223 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||||||| Sbjct 253222 TGCGGCCCAGAACATCTAAGGGCATCACAG 253193 >seq166 Length=529 Score = 147 bits (162), Expect = 3e-33 Identities = 102/115 (89%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||||||| | ||| |||||||||| || |||| || | | ||||||||||||| Sbjct 522 AAGATTACCCAGGCCTTTCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCG 465 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 464 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 410 >seq247 Length=574 Score = 95.1 bits (104), Expect = 2e-17 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||| | ||| Sbjct 504 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGGA-TTC 561 Query 61 CTCGTTGAAGA 71 ||||||||||| Sbjct 562 CTCGTTGAAGA 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996539625