Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq66 100 5e-19
seq179 80.6 5e-13
>seq66
Length=490279
Score = 100 bits (110), Expect = 5e-19
Identities = 65/70 (93%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 169 TTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCA 228
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 15719 TTTCTAGGACCGCCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCA 15778
Query 229 G-AGGTGAAA 237
| | ||||||
Sbjct 15779 GAAAGTGAAA 15788
>seq179
Length=529056
Score = 80.6 bits (88), Expect = 5e-13
Identities = 50/54 (93%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 103 GCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||||||||||||||||| |||||||||||| | ||||||||| ||||
Sbjct 499959 GCAGGCCTTTGCTCGAATACATTAACATGGAATAATAAATTAGGACGTGTGGTT 500012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195652800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |