Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq453 277 7e-72
seq289 154 6e-35
seq428 77.0 1e-11
>seq453
Length=211498
Score = 277 bits (306), Expect = 7e-72
Identities = 184/203 (91%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
|||||||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||
Sbjct 120609 GCCTAGCCTCTGTGAAACTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 120668
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 120669 GGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 120728
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct 120729 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAG 120788
Query 193 GGAAGCGCTTGCAACCAGACTTG 215
||||||| | ||||||||||
Sbjct 120789 GGAAGCGTTCATGACCAGACTTG 120811
>seq289
Length=574
Score = 154 bits (170), Expect = 6e-35
Identities = 93/98 (95%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 60
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||| |||| || |||||||
Sbjct 61 ACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 98
>seq428
Length=240804
Score = 77.0 bits (84), Expect = 1e-11
Identities = 58/67 (87%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
|||||||| |||||| ||||||||||| ||||||| |||||||||| | || ||||||
Sbjct 75083 GCCTAGCCTCTGTGAAACTCCTTCGACGGGTCGAGTAGTTTGGGAATCCTGCCCTAAATA 75142
Query 73 GGAGGTA 79
|||||||
Sbjct 75143 GGAGGTA 75149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079989811250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |