Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq453 277 7e-72 seq289 154 6e-35 seq428 77.0 1e-11 >seq453 Length=211498 Score = 277 bits (306), Expect = 7e-72 Identities = 184/203 (91%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 |||||||| |||||| ||||||| ||||||||||| |||||||||||| |||||||||| Sbjct 120609 GCCTAGCCTCTGTGAAACTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 120668 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 120669 GGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 120728 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| Sbjct 120729 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAG 120788 Query 193 GGAAGCGCTTGCAACCAGACTTG 215 ||||||| | |||||||||| Sbjct 120789 GGAAGCGTTCATGACCAGACTTG 120811 >seq289 Length=574 Score = 154 bits (170), Expect = 6e-35 Identities = 93/98 (95%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 60 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||| |||| || ||||||| Sbjct 61 ACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 98 >seq428 Length=240804 Score = 77.0 bits (84), Expect = 1e-11 Identities = 58/67 (87%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 |||||||| |||||| ||||||||||| ||||||| |||||||||| | || |||||| Sbjct 75083 GCCTAGCCTCTGTGAAACTCCTTCGACGGGTCGAGTAGTTTGGGAATCCTGCCCTAAATA 75142 Query 73 GGAGGTA 79 ||||||| Sbjct 75143 GGAGGTA 75149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989811250