Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq129 140 8e-31 >seq129 Length=9560 Score = 140 bits (154), Expect = 8e-31 Identities = 199/277 (72%), Gaps = 11/277 (4%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 9402 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 9343 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 9342 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 9283 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 | |||| ||||||| || ||||||| ||| |||| | | ||||| | | | Sbjct 9282 CA-CGTTAAGGCCGCCTTTAACCGGGGGTTCTGTCAACATC-AAATGTTAGATCATTTAA 9225 Query 191 TCA-----ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245 | | ||||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 9224 TTATCTTCATTAACCAGCCGGCACCGGGCAGATTTCACACTTTATACATAGATTTTTTTA 9165 Query 246 TTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | ||| ||||||||||||| | |||||||||| Sbjct 9164 TCTTTAAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 9128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260794011200