Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq247 100 2e-19
seq431 78.8 6e-13
>seq247
Length=574
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 464 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 521
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 522 TAAT-CAACGCAAGCT 536
>seq431
Length=261634
Score = 78.8 bits (86), Expect = 6e-13
Identities = 65/76 (86%), Gaps = 5/76 (7%)
Strand=Plus/Minus
Query 52 ACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTA- 110
||| ||||||| || ||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 253435 ACTGAGCCATT-CAGTCGGTAGTA-GCGACGGGCGGTGTGTACAAGGGGCAGGGACGTAC 253378
Query 111 --ATACAACGCAAGCT 124
| |||||||||||
Sbjct 253377 CTAATCAACGCAAGCT 253362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300798660500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |