Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq247 100 2e-19 seq431 78.8 6e-13 >seq247 Length=574 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 464 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 521 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 522 TAAT-CAACGCAAGCT 536 >seq431 Length=261634 Score = 78.8 bits (86), Expect = 6e-13 Identities = 65/76 (86%), Gaps = 5/76 (7%) Strand=Plus/Minus Query 52 ACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTA- 110 ||| ||||||| || ||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 253435 ACTGAGCCATT-CAGTCGGTAGTA-GCGACGGGCGGTGTGTACAAGGGGCAGGGACGTAC 253378 Query 111 --ATACAACGCAAGCT 124 | ||||||||||| Sbjct 253377 CTAATCAACGCAAGCT 253362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798660500