Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq66 86.0 6e-15
seq179 84.2 2e-14
>seq66
Length=490279
Score = 86.0 bits (94), Expect = 6e-15
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 108 TTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTC 167
|||||||||||||| |||||||| |||| ||| ||||||||| ||||||||||||||||
Sbjct 15719 TTTCTAGGACCGCC-GTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTC 15777
Query 168 A-AAGGTGAAA 177
| || ||||||
Sbjct 15778 AGAAAGTGAAA 15788
>seq179
Length=529056
Score = 84.2 bits (92), Expect = 2e-14
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 32 AGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGC 91
|||| || | |||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct 499949 AGCGCTCCACGCAGGCCTTTGCTCGAATACATTAACATGGAATAATAAATTAGGACGTGT 500008
Query 92 GGTT 95
||||
Sbjct 500009 GGTT 500012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511997644000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |