Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq66 86.0 6e-15 seq179 84.2 2e-14 >seq66 Length=490279 Score = 86.0 bits (94), Expect = 6e-15 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 108 TTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTC 167 |||||||||||||| |||||||| |||| ||| ||||||||| |||||||||||||||| Sbjct 15719 TTTCTAGGACCGCC-GTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTC 15777 Query 168 A-AAGGTGAAA 177 | || |||||| Sbjct 15778 AGAAAGTGAAA 15788 >seq179 Length=529056 Score = 84.2 bits (92), Expect = 2e-14 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 32 AGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGC 91 |||| || | |||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct 499949 AGCGCTCCACGCAGGCCTTTGCTCGAATACATTAACATGGAATAATAAATTAGGACGTGT 500008 Query 92 GGTT 95 |||| Sbjct 500009 GGTT 500012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997644000