Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq396 641 0.0 seq381 491 1e-136 seq332 116 1e-23 >seq396 Length=970 Score = 641 bits (710), Expect = 0.0 Identities = 410/445 (92%), Gaps = 5/445 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 531 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 590 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 591 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 650 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 651 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTCATTGA 708 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 709 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 765 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 766 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 825 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 885 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 886 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 945 Query 427 TGGCTACCTTAAGAGAGTCATAGTT 451 ||||||||||||||||||||||||| Sbjct 946 TGGCTACCTTAAGAGAGTCATAGTT 970 >seq381 Length=138816 Score = 491 bits (544), Expect = 1e-136 Identities = 372/436 (85%), Gaps = 7/436 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| ||||||||||||||| || || ||| ||||||||||||| |||| Sbjct 112319 CTTTTATTCTACTAGAGATTTCTGTTCTCTATAAGCCCCTCTTAGGACACCTGTATTATA 112260 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||| | | |||||||| ||||||||||||| ||||| || ||||||||| || Sbjct 112259 GTTTAACAGATATACTGCCCCAGCTAAACTCCCCACCTAACAATATCTTCAACCCGGGTC 112200 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTG 185 |||||| ||| ||||||| |||||| | | | | | | |||| |||||||||| Sbjct 112199 AGCCCGCAAAGAACCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCGCTTCATTA 112143 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | ||||||||||||| ||| | ||||| ||||||||| |||||||| |||||||| | Sbjct 112142 AATAAGTAAAAAAACAATAGGAGTAGTAGTATTTCACCGGCGCCGAA---GCTCCCACCT 112086 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||| ||||| | || |||||||| || |||||||||||||||||||||||||| Sbjct 112085 ATTCTATACCTCCTATATCTTTTCACAATATCAAACTAGAGTCAAGCTCAACAGGGTCTT 112026 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 112025 CTTTCCCCGCTGATTCTACCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGAT 111966 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct 111965 AGGGACAGTGGGAATCTCGTTAATCCATTCATACGCATCACTAATTAGATAACGAGGCAT 111906 Query 426 TTGGCTACCTTAAGAG 441 |||||||||||||||| Sbjct 111905 TTGGCTACCTTAAGAG 111890 Score = 159 bits (176), Expect = 1e-36 Identities = 97/103 (94%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||| Sbjct 111514 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCGAATGGCTTCGCTTTGATATTC 111455 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 111454 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 111412 >seq332 Length=26218 Score = 116 bits (128), Expect = 1e-23 Identities = 64/64 (100%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 161 Query 423 CATT 426 |||| Sbjct 162 CATT 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635192232800