Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq396 641 0.0
seq381 491 1e-136
seq332 116 1e-23
>seq396
Length=970
Score = 641 bits (710), Expect = 0.0
Identities = 410/445 (92%), Gaps = 5/445 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 531 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 590
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 591 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 650
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 651 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTCATTGA 708
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 709 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 765
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 766 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 825
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 885
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 945
Query 427 TGGCTACCTTAAGAGAGTCATAGTT 451
|||||||||||||||||||||||||
Sbjct 946 TGGCTACCTTAAGAGAGTCATAGTT 970
>seq381
Length=138816
Score = 491 bits (544), Expect = 1e-136
Identities = 372/436 (85%), Gaps = 7/436 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||||| ||||||||||||||| || || ||| ||||||||||||| ||||
Sbjct 112319 CTTTTATTCTACTAGAGATTTCTGTTCTCTATAAGCCCCTCTTAGGACACCTGTATTATA 112260
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||| | | |||||||| ||||||||||||| ||||| || ||||||||| ||
Sbjct 112259 GTTTAACAGATATACTGCCCCAGCTAAACTCCCCACCTAACAATATCTTCAACCCGGGTC 112200
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTG 185
|||||| ||| ||||||| |||||| | | | | | | |||| ||||||||||
Sbjct 112199 AGCCCGCAAAGAACCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCGCTTCATTA 112143
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| ||||||||||||| ||| | ||||| ||||||||| |||||||| |||||||| |
Sbjct 112142 AATAAGTAAAAAAACAATAGGAGTAGTAGTATTTCACCGGCGCCGAA---GCTCCCACCT 112086
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||| ||||| | || |||||||| || ||||||||||||||||||||||||||
Sbjct 112085 ATTCTATACCTCCTATATCTTTTCACAATATCAAACTAGAGTCAAGCTCAACAGGGTCTT 112026
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 112025 CTTTCCCCGCTGATTCTACCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGAT 111966
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
|||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct 111965 AGGGACAGTGGGAATCTCGTTAATCCATTCATACGCATCACTAATTAGATAACGAGGCAT 111906
Query 426 TTGGCTACCTTAAGAG 441
||||||||||||||||
Sbjct 111905 TTGGCTACCTTAAGAG 111890
Score = 159 bits (176), Expect = 1e-36
Identities = 97/103 (94%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct 111514 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCGAATGGCTTCGCTTTGATATTC 111455
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 111454 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 111412
>seq332
Length=26218
Score = 116 bits (128), Expect = 1e-23
Identities = 64/64 (100%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 102 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 161
Query 423 CATT 426
||||
Sbjct 162 CATT 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635192232800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |