Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq396 206 4e-51
seq320 114 2e-23
>seq396
Length=970
Score = 206 bits (228), Expect = 4e-51
Identities = 163/190 (86%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 208 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 151
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 150 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 91
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | |||||| | | || |||| | || ||| | |||||||||||||| |
Sbjct 90 GAAAGCGGTGATAC-CACCCGCACGT-ACAGATGGACAAGAATAGGCTTCGGCTTAGCGT 33
Query 181 CTTAGCAGGC 190
||||||||||
Sbjct 32 CTTAGCAGGC 23
>seq320
Length=92412
Score = 114 bits (126), Expect = 2e-23
Identities = 139/184 (76%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65
||||||||||| | |||||| ||||| |||||| | ||| || |||| |||||| | |
Sbjct 41943 AGAGGAACCGCTTA-TTCAGA-TAATTAGTTTTTACAGCTATCCGACCGGGCAGTACTAC 41886
Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACG 125
||||||| ||||||||||| || |||||| ||||||||| |||||| || |||||| |
Sbjct 41885 AAAGCTACTATCTGCTGGATAATAGCTGAATACCTCTAAGTTAGAATCTATACCAGAAAG 41826
Query 126 GGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAG 185
||| || || || | | || || || | ||||||||||| || | | |||||
Sbjct 41825 TGGTAATACT-ACCCGTATAT-ACAGATAGACAAGAATAGGCTTCAGCTTAGTATCTTAG 41768
Query 186 CAGG 189
||||
Sbjct 41767 CAGG 41764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819196230400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |