Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq396 206 4e-51 seq320 114 2e-23 >seq396 Length=970 Score = 206 bits (228), Expect = 4e-51 Identities = 163/190 (86%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 208 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 151 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 150 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 91 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | |||||| | | || |||| | || ||| | |||||||||||||| | Sbjct 90 GAAAGCGGTGATAC-CACCCGCACGT-ACAGATGGACAAGAATAGGCTTCGGCTTAGCGT 33 Query 181 CTTAGCAGGC 190 |||||||||| Sbjct 32 CTTAGCAGGC 23 >seq320 Length=92412 Score = 114 bits (126), Expect = 2e-23 Identities = 139/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65 ||||||||||| | |||||| ||||| |||||| | ||| || |||| |||||| | | Sbjct 41943 AGAGGAACCGCTTA-TTCAGA-TAATTAGTTTTTACAGCTATCCGACCGGGCAGTACTAC 41886 Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACG 125 ||||||| ||||||||||| || |||||| ||||||||| |||||| || |||||| | Sbjct 41885 AAAGCTACTATCTGCTGGATAATAGCTGAATACCTCTAAGTTAGAATCTATACCAGAAAG 41826 Query 126 GGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAG 185 ||| || || || | | || || || | ||||||||||| || | | ||||| Sbjct 41825 TGGTAATACT-ACCCGTATAT-ACAGATAGACAAGAATAGGCTTCAGCTTAGTATCTTAG 41768 Query 186 CAGG 189 |||| Sbjct 41767 CAGG 41764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196230400