Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21]
475 sequences; 55,416,396 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq459 735 0.0
seq395 95.1 4e-17
>seq459
Length=1128
Score = 735 bits (814), Expect = 0.0
Identities = 466/504 (92%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 196 GTACTCATTCCAATTACAAGATCCAAAAGAACCCTGTATCAGTATTTATTGTCACTACCT 255
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 256 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGCT 315
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 316 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 375
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 376 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 435
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||
Sbjct 436 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCAGAGAGCCCCGAAGGGCATTGGT 495
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||
Sbjct 496 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTAAGCATGTATTAGCTCTAG 555
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 556 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 615
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 616 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 674
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 675 AGACAAGCATATGACTACTGGCAG 698
>seq395
Length=581541
Score = 95.1 bits (104), Expect = 4e-17
Identities = 54/55 (98%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 159878 TTATACTTAGACGTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 159824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392825600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |