Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq72 262 3e-65 seq272 122 7e-23 >seq72 Length=1307737 Score = 262 bits (290), Expect = 3e-65 Identities = 1213/1896 (64%), Gaps = 84/1896 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | ||||| |||| || | ||||||||||||||| || Sbjct 1154001 ATCGACAGTGAACTGAATAGGGGCCGCAGCAGCCTGAGTACGAAGATAGTACATGCCAGT 1153942 Query 65137 CTTGAGGCC-AG---CACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCG 65192 ||| || || || | |||| ||| || ||||| || |||| |||| | | | Sbjct 1153941 CTTAAGCCCCAGTTTCCAGCCA-GCAAAG---TGCATAC-TGGTAATCTTGCCCATTGAG 1153887 Query 65193 GC-TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCA 65251 | || || ||| || || | || ||| || || ||| || ||| ||||| || Sbjct 1153886 GGATCCTTCATATGGATGTTGAGAGATTGAGATTGGTCAATGAAAGCACCTCGATCGGCG 1153827 Query 65252 GCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACG 65307 ||||| | | | ||||| || |||||||||||||||||||| || || || | Sbjct 1153826 GCCATCTGCACAACTTGACGTTGAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGAGG 1153767 Query 65308 TACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATT 65367 | | ||| || || | ||||| |||| ||||| | ||||| || || || Sbjct 1153766 T-CATCA---GGGATGTTGGGAATGTTTTGGATCGAACCTTGCTCAGCAATGATTCGGTT 1153711 Query 65368 ACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC---GATT 65424 ||| | || |||||||| ||||| || | ||||| || |||| | | | || Sbjct 1153710 CTTCATGGCATCGGACCACAAGCCCAACTCAACAAGATCTTT---CAAGAGCCAGGGGTT 1153654 Query 65425 GATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTC 65484 || ||| |||||||| || | ||| ||||| ||| |||||||| || ||| ||| || Sbjct 1153653 GACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTTGATGTGTAGGGCTC 1153594 Query 65485 AAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAA 65544 ||| ||||| ||||||||| || || | ||| || || ||||| || || || | Sbjct 1153593 GAAGCATTCATTGTTGCCTAAGATCTGAGAGGTACTGGCGGTAGGCATAGGGGCCACGAG 1153534 Query 65545 CAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACAT 65604 || ||| || | |||| | | || | | || | ||||| | ||| | Sbjct 1153533 CAGACTGTTGCGGATACCGTGCTCCTTGATCTGCTCTCGAAGGGTCTCCCACTCCCAAA- 1153475 Query 65605 CGGTTTATCGTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG--G 65660 ||| | | |||| | ||||| || || ||| |||| ||| | Sbjct 1153474 -GGTCAGAGGGGGTGACATTC------CACATGTCGAACTGAAGGATTCCCT--CTGAAG 1153424 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || || || ||| | | ||| || | |||||| || |||| || ||| || Sbjct 1153423 CTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTC-CA--TGGACT 1153367 Query 65721 CG---AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCAT 65777 | || |||||| || || |||||||| || | || || | ||| |||||| Sbjct 1153366 CAGTAAGGGCGGCATGGTAGATAGTCTCGAAGATCTGCTTGTTTAGCTGACGAGCCTCAG 1153307 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTG--TCGGCCAGACCTTGAACTCCAAT 65835 |||| | ||||| | | | ||| | || || || ||||| ||||| |||| Sbjct 1153306 GCGACTCGAAAGGCATGCGTAGA--GCCAAGAATGCATCTGCAAGACCCTGAACACCAAG 1153249 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGAT 65895 ||| ||||| |||||||||| ||| | ||||| | || |||||||| |||| Sbjct 1153248 ACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTAGTTGAC 1153189 Query 65896 ATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA---CGTCGCAATTGTTC 65952 |||||| || || |||| || || ||||||| ||| | || | Sbjct 1153188 ATCGATGATACGGTTCAGGTTACG------------CACGATAACCCGTGTAACTTCGTG 1153141 Query 65953 GAAAT-CAAAATGTT-TAGGA-CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGC 66009 || | | || ||| ||| | | ||| || | | || | ||| || || Sbjct 1153140 GAGCTTCTTAAAGTTGTAGCAGCCCTCGT------CGTAATCAACGTAGGCGGGCAGAGC 1153087 Query 66010 AAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGT 66069 || || || |||||||| ||||| | ||| || |||||| || || | ||| || || Sbjct 1153086 CAGCGAAGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCAGTATTCAATAATCTCAGT 1153027 Query 66070 GCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGC 66129 ||| ||||| || ||| || || |||| |||| || || ||||| || ||||| || Sbjct 1153026 GCAAAGATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGC 1152967 Query 66130 ATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 ||||||||| | |||| | || | || ||||| ||||| || | || | || ||| Sbjct 1152966 ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGAATCGAGTACCA 1152907 Query 66190 AAGAGCGCGTGCCTTCACCGT---ACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGT 66245 || | || | ||| ||| | || || |||| || || | |||| Sbjct 1152906 CAGCTTCTGGGCACGGATCGTCTGACGACCACGACCCTCCTTC----TCATACTTCTCGT 1152851 Query 66246 AGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACA 66305 | ||| || || || || | || | ||| | || |||| || || |||| Sbjct 1152850 AAAGGGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACA 1152791 Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 | || | ||| | | | || || || || ||| || |||||||| ||||| || | Sbjct 1152790 TGAGAGTCCAGTTCTCGTTCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCATAGAG 1152731 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425 | ||| || || ||||| || ||| || | |||||||| || || | || |||| Sbjct 1152730 CTAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGATCCAGGA 1152671 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 |||| |||| || | ||||| || || || ||||| || || | || || ||| Sbjct 1152670 ACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCAGGGCGCTTGT 1152611 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 |||||| || || || || | || |||||||| || |||| ||| || | || | Sbjct 1152610 TGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTC 1152551 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | || ||| |||| ||||| ||| | ||| || ||| || || || |||||| | Sbjct 1152550 CATTGGATGTGCCGTTGGTTCCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGT 1152491 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCG-GCCACTGTCCGGAA 66663 | ||||| ||||| || ||| |||| ||||| ||||| || | | | || | | Sbjct 1152490 TGAGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATC--GTA 1152433 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTT 66723 || ||||||||| |||| |||| || | ||| ||||||| || || | | Sbjct 1152432 GATACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTG 1152373 Query 66724 GGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTA 66783 ||| || |||| |||||| ||||| | ||| || |||||| | | | |||||||| Sbjct 1152372 GGGGGTACCGGCATTGAAGAGAGTGGGAGAAGCATGAGTAAAGAACTTGTTGGACATGTA 1152313 Query 66784 ATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCAT 66843 ||||| |||||||||||| |||||||| || || || || | ||| ||||| Sbjct 1152312 GTTGTAGGTCTCGATGACACGTTCAATGTTATCACCCCAGATACCCACAGCAACACGCAT 1152253 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 | | || || || || || || | | | |||| | | | ||||| || || Sbjct 1152252 GATCATGTGCTGTGGGCGCTCAACAATCTTGCCGTTGAGCTTGAGGAGATAGGAACGCTC 1152193 Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| ||||||| ||| |||||| || |||||||| Sbjct 1152192 CAGTGTCTTGAAACCGAAGTACTGATAGTTGAAATC 1152157 >seq272 Length=795643 Score = 122 bits (134), Expect = 7e-23 Identities = 231/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| |||||||| |||||||| | ||||| ||||| || Sbjct 62685 ATCTGGCAAATGTACAAGAAGCACGAAGCTTCTTTCTGGACTGCTGAGGAAATCGATCTG 62744 Query 61147 TCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAAC---ATTTCATTAA 61202 ||||| || | | |||||| | | || || || ||| | | | ||| | Sbjct 62745 TCCAAGGATCTCCACGACTGGCACACCCGCAT-GAACGATGACGAGCGCTACTTCGTCTC 62803 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || || || || ||||||||||| | | || || Sbjct 62804 TCACGTTCTTGCCTTCTTCGCTGCCTCTGATGGCATTGTCAATGAGAACCTGGTTGAGCG 62863 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| ||||| || | | ||||| || || |||||||| |||||||| | Sbjct 62864 CTTCAGCGC-TGAGGTCCAGATTCCTGAGGCTCGGTGCTTCTACGGATTCCAGATCATGA 62922 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| ||| | |||||||| || ||||||| ||| | || Sbjct 62923 TGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATCGACACATACATCAAGGAACAGG 62982 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415 | | || || |||||||||| || ||||| Sbjct 62983 CTCAGCGCGAGTACCTGTTCAATGCTATTGAGAC 63016 Score = 118 bits (130), Expect = 8e-22 Identities = 282/423 (67%), Gaps = 5/423 (1%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || ||||| | || ||||| || | || || | ||||| ||||||||||| ||||| Sbjct 63163 GTTGAGGGCATCTTCTTCAGCGGTGCTTTCGCTTCCATCTTCTGGTTGAAGAAGCGTGGT 63222 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| ||||| |||||| ||| ||| |||| || || |||||||| | || | Sbjct 63223 CTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCCCGTGACGAGGGTCTTCACACT 63282 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || ||| | ||| || | | | || ||||| | ||||| || Sbjct 63283 GACTTCGCT---TGCCTACTCCACTCCCACCTAAACAATCGCGCAAGCAAGGAG-GTCAT 63338 Query 61690 GGTGAGATTGTTCG-TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 | ||| | || ||| || || || || || |||| || |||| || ||| | || Sbjct 63339 TGAGAGCATCATCACTGACGCCGTCACCATTGAGAAGGAGTTCTTGACCGAGGCTCTTCC 63398 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 | | | | |||||||| || ||| ||||||||| || ||||||||||| Sbjct 63399 TTGCGCCATGCTGGGCATGAACGCCAACCTTATGAAGCAGTATATCGAGTTTGTTGCCGA 63458 Query 61809 CCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 |||||| |||| | | | |||| | | | || || ||| ||||| || || || Sbjct 63459 CCGTCTTCTGGTTGCTCTCGGTAACGACAAGGTGTACAAGTCGACTAACCCCTTCGACTT 63518 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||||| | ||||| || | |||||||| || || |||||||| || || || ||||| Sbjct 63519 CATGGAGAACATTTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 63578 Query 61929 TCA 61931 || Sbjct 63579 CCA 63581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565698454000