Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq179 152 2e-34 seq119 80.6 1e-12 >seq179 Length=36375 Score = 152 bits (168), Expect = 2e-34 Identities = 155/201 (77%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 15 CCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73 ||||||| | | || |||||| | |||||||| |||| ||||| | ||||||||| | Sbjct 24483 CCTAGCCTCTATAAAACTCCTTTAATAAGTCGAGTAGTTTAGGAATACTGCTCTAAATAG 24424 Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133 ||||| || ||||||||||||||||| ||||||||| |||| | ||||||||| Sbjct 24423 AAGGTATATATCTTCTAAAGCTAAATACCAGCCAGAGACTAATAGTATATAAGTAGAGTA 24364 Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 || |||||| ||||| ||||| |||||| ||||||| | | | ||||| || ||||| Sbjct 24363 ATTAAAAGATAAAAAGTACTTTAAAAAGAGGGTTAAAAGGTATATAAAATTATTAAAAGG 24304 Query 194 GAAGCGCTTGCAACCAGACTT 214 |||| || |||||||||| Sbjct 24303 GAAGTATTTATAACCAGACTT 24283 Score = 84.2 bits (92), Expect = 9e-14 Identities = 106/145 (73%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 540 GATGGATTTGAGTAAGAGCATA----GCTGTTGGGACCCGAAAGATGGTGAACTATGCCT 595 ||| ||||| |||||||| ||| |||| || | |||||| ||| |||||| ||| Sbjct 23967 GATAGATTTAAGTAAGAGTATATAGAGCTG----GATCTGAAAGAAGGTAAACTATACCT 23912 Query 596 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 ||||||| |||||||||||| |||| || |||||| || |||||| | |||| Sbjct 23911 ATATAGGGTAAAGCCAGAGGAACCTCTAGTAGAGGCTTATAGTAGTTCTGATATATAAAT 23852 Query 656 CGATCGTCAAATTTGGGTATAGGGG 680 || | |||| | |||||||||| Sbjct 23851 TAATTATTAAATATAGGTATAGGGG 23827 >seq119 Length=92649 Score = 80.6 bits (88), Expect = 1e-12 Identities = 61/71 (86%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 14 GCCTAGCCGT--GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT 71 |||||||| | ||||| |||||||||| |||||||| |||| ||||| | ||||||||| Sbjct 89043 GCCTAGCCCTTTGTGAAACTCCTTCGACAAGTCGAGTAGTTTAGGAATCCTGCTCTAAAT 89102 Query 72 GGGAGGTAAAT 82 |||||||| || Sbjct 89103 GGGAGGTATAT 89113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079983118850