Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq424 95.1 4e-17 >seq424 Length=2743 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||||| Sbjct 1970 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATAAGCCTATACAAAGA 1911 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || || |||||||| | ||| | | | ||||||||||| Sbjct 1910 GATGCGAAAATGTGAATTCTAGCAAATCTCCAAAATAGGAAATAAAAA-GGATTGTAGTC 1852 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || || ||||||||||||| | ||| ||||||||||| |||| |||| ||||||| Sbjct 1851 TGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACGGTGA 1792 Query 486 AT 487 || Sbjct 1791 AT 1790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503988163520