Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09]
787 sequences; 55,184,262 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq51 107 3e-21
seq16 105 1e-20
>seq51
Length=264222
Score = 107 bits (118), Expect = 3e-21
Identities = 85/98 (87%), Gaps = 7/98 (7%)
Strand=Plus/Minus
Query 202 CAGTTA-TCCCTGTGGTAACTTTTCTGGCA----CCTCTAGCCTCAAATTTCGAGGGACT 256
|||||| ||||||| ||||||||| ||||| |||||||| ||| | |||| |||||
Sbjct 159797 CAGTTAATCCCTGTAGTAACTTTT-TGGCATTGACCTCTAGCTTCACACATCGAAGGACT 159739
Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
|||| |||||||||||||||||||||||||||||||||
Sbjct 159738 AAAG-ATCGATAGGCCACACTTTCATGGTTTGTATTCA 159702
>seq16
Length=786998
Score = 105 bits (116), Expect = 1e-20
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct 159452 TTAGTAAGTGAACAATCCAACGCTTACCGAATTCTACTTTGTTATGATAGGAAGAGCCGA 159511
Query 151 CATCGAAGGATCAAAA 166
|||||| ||||||||
Sbjct 159512 TATCGAAAGATCAAAA 159527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854393275872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |