Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq51 107 3e-21 seq16 105 1e-20 >seq51 Length=264222 Score = 107 bits (118), Expect = 3e-21 Identities = 85/98 (87%), Gaps = 7/98 (7%) Strand=Plus/Minus Query 202 CAGTTA-TCCCTGTGGTAACTTTTCTGGCA----CCTCTAGCCTCAAATTTCGAGGGACT 256 |||||| ||||||| ||||||||| ||||| |||||||| ||| | |||| ||||| Sbjct 159797 CAGTTAATCCCTGTAGTAACTTTT-TGGCATTGACCTCTAGCTTCACACATCGAAGGACT 159739 Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| ||||||||||||||||||||||||||||||||| Sbjct 159738 AAAG-ATCGATAGGCCACACTTTCATGGTTTGTATTCA 159702 >seq16 Length=786998 Score = 105 bits (116), Expect = 1e-20 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||||| Sbjct 159452 TTAGTAAGTGAACAATCCAACGCTTACCGAATTCTACTTTGTTATGATAGGAAGAGCCGA 159511 Query 151 CATCGAAGGATCAAAA 166 |||||| |||||||| Sbjct 159512 TATCGAAAGATCAAAA 159527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854393275872