Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09]
787 sequences; 55,184,262 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq51 266 6e-69
seq16 113 9e-23
>seq51
Length=264222
Score = 266 bits (294), Expect = 6e-69
Identities = 188/212 (89%), Gaps = 11/212 (5%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 200970 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 200911
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTG-----GGGA 240
| || ||||||||| |||| ||||||||||||||||||||| ||||||||| ||||
Sbjct 200910 C-TC-CCTTGGCCGAAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGTGCTGGGGA 200853
Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300
|||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||
Sbjct 200852 TAGAGCATTGCAATGATTGCTCTTCAAAGAGGAATCCCTAGTAAGCGCAAGTCATCAGCT 200793
Query 301 CGCGTTGAT----TACGTCCCTGCCCTTTGTA 328
|||||||| |||||||||||||||||||
Sbjct 200792 TGCGTTGATTAGGTACGTCCCTGCCCTTTGTA 200761
>seq16
Length=786998
Score = 113 bits (124), Expect = 9e-23
Identities = 145/202 (72%), Gaps = 16/202 (8%)
Strand=Plus/Plus
Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186
||||||||||||||||||||||||| | | |||||| || |||| |
Sbjct 119543 TGTGATGCCCTTAGATGTTCTGGGCTGTAGGCGCGC--------------CATTGAGTAC 119588
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
| |||||| | ||| | ||||||| | ||| | | ||| |||||| || | ||
Sbjct 119589 TGC--CTTGGCTGAAAGACCGAGGTAATCATCTTAGGCCCCGTCATGCTGGAGAAACAGT 119646
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||| |||||||| ||||| ||||| | | ||| |||||||| |||| | || || ||
Sbjct 119647 ATTTCAATTATTACTCTTTAACGAAGGTTCCCTGGTAAGCGCAAGTCACCGGCTTGCTTT 119706
Query 307 GATTACGTCCCTGCCCTTTGTA 328
|||| |||||||||||||||||
Sbjct 119707 GATTTCGTCCCTGCCCTTTGTA 119728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947192545536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |