Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq51 266 6e-69 seq16 113 9e-23 >seq51 Length=264222 Score = 266 bits (294), Expect = 6e-69 Identities = 188/212 (89%), Gaps = 11/212 (5%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 200970 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 200911 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTG-----GGGA 240 | || ||||||||| |||| ||||||||||||||||||||| ||||||||| |||| Sbjct 200910 C-TC-CCTTGGCCGAAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGTGCTGGGGA 200853 Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 |||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||| Sbjct 200852 TAGAGCATTGCAATGATTGCTCTTCAAAGAGGAATCCCTAGTAAGCGCAAGTCATCAGCT 200793 Query 301 CGCGTTGAT----TACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||||||||||||| Sbjct 200792 TGCGTTGATTAGGTACGTCCCTGCCCTTTGTA 200761 >seq16 Length=786998 Score = 113 bits (124), Expect = 9e-23 Identities = 145/202 (72%), Gaps = 16/202 (8%) Strand=Plus/Plus Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||||||||||||||||||||||||| | | |||||| || |||| | Sbjct 119543 TGTGATGCCCTTAGATGTTCTGGGCTGTAGGCGCGC--------------CATTGAGTAC 119588 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | |||||| | ||| | ||||||| | ||| | | ||| |||||| || | || Sbjct 119589 TGC--CTTGGCTGAAAGACCGAGGTAATCATCTTAGGCCCCGTCATGCTGGAGAAACAGT 119646 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||| |||||||| ||||| ||||| | | ||| |||||||| |||| | || || || Sbjct 119647 ATTTCAATTATTACTCTTTAACGAAGGTTCCCTGGTAAGCGCAAGTCACCGGCTTGCTTT 119706 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||| Sbjct 119707 GATTTCGTCCCTGCCCTTTGTA 119728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192545536