Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq127 291 6e-74 seq9 131 1e-25 >seq127 Length=80722 Score = 291 bits (322), Expect = 6e-74 Identities = 1212/1890 (64%), Gaps = 72/1890 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | ||||| |||| || | ||||||||||||||| || Sbjct 28845 ATCGACAGTGAACTGAATAGGGGCCGCAGCAGCCTGAGTACGAAGATAGTACATGCCAGT 28786 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGC-T 65195 |||||| || ||| || || ||||| || |||| |||| | | || | Sbjct 28785 CTTGAGTCCCAATTTCCAGCCAGCAAAGTGCATAC-TGGTAATCTTGCCCATTGAGGGAT 28727 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || ||| || || | || ||| || || ||| || ||| ||||| || |||| Sbjct 28726 CCTTCATATGGATGTTGAGAGATTGAGATTGGTCAATGAAAGCACCTCGATCGGCGGCCA 28667 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | | ||||| || |||||||||||||||||||| ||| | | | | ||| Sbjct 28666 TCTGCACAACTTGACGTTGAGAAATCTCCCAGACGGTCTTGTAGAGG-GCCTTGAGGTCA 28608 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | |||| |||| ||||| | |||||||| || || ||| Sbjct 28607 TCAGGGATGTTGGGGATGTTTTGGATCGAACCTTGTTCAGCAATAATTCGGTTCTTCATG 28548 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430 | || |||||||| ||||| || | ||||| || || ||| | | |||| ||| Sbjct 28547 GCATCGGACCACAAGCCCAACTCAACAAGATCTTTTAAGAGCCAGGGG----TTGACGAC 28492 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| || | ||| ||||| ||| ||||||||||| ||| ||| || ||| | Sbjct 28491 CTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTGGATGTGTAGGGCTCGAAGCA 28432 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 |||| ||||||| | || || | ||| || || ||||| ||||| || | || Sbjct 28431 TTCATTGTTGCCCAAGATCTGAGAGGTACTGGCTGTGGGCATAGGAGCCACGAGCAGACT 28372 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 ||| || | |||| | || || | | || | ||||| | ||| | ||| Sbjct 28371 GTTGCGGATACCGTGCTCTTTGATCTGCTCTCGAAGCGTCTCCCACTCCCAAA--GGTCA 28314 Query 65611 ATCGTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG--GCCGGTG 65666 | | |||| | ||||| || || ||| |||| ||| || || | Sbjct 28313 GAGGGGGTGACATTC------CACATGTCGAACTGAAGGATTCCCT--CTGAAGCTGGGG 28262 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCG---A 65723 | || ||| | | ||| || | |||||| || |||| || ||| ||| | Sbjct 28261 ATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTC-CA--TGGACTCAGTAA 28205 Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCT 65783 | |||||| || || |||||||| || | ||| || | ||| |||||| || Sbjct 28204 GGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCTGACGAGCCTCAGGCGACT 28145 Query 65784 CGTACGGCATACCCATCAGGACAAAAGTG--TCGGCCAGACCTTGAACTCCAATACCGAT 65841 || | ||||| | || | ||| | || || || ||||| ||||| |||| ||| || Sbjct 28144 CGAAAGGCATGCGCAGA--GCCAAGAATGCATCTGCAAGACCCTGAACACCAAGACCAAT 28087 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 ||| |||||||||| ||| | ||||| | || |||||||| |||| |||||| Sbjct 28086 GGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTAGTTGACATCGAT 28027 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA---CGTCGCAATTGTTCGAAAT- 65957 || || |||| || || ||||||| ||| | || | || | Sbjct 28026 GATACGGTTCAGGTTACG------------CACGATAACCCGTGTAACTTCGTGGAGCTT 27979 Query 65958 CAAAATGTT-TAGGA-CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGA 66015 | | ||| ||| | | ||| || | | || | ||| || || || || Sbjct 27978 CTTGAAGTTGTAGCAGCCCTCGT------CGTAATCAACGTAGGCGGGCAGAGCCAGCGA 27925 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || |||||||| ||||| | ||| || |||||| || || | ||| || ||||| || Sbjct 27924 AGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCAGTATTCAATAATCTCAGTGCAAAG 27865 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 ||| || ||| || || |||| |||| || || ||||| || ||||| |||||||| Sbjct 27864 ATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTT 27805 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 ||| | |||| | || | || ||||| ||||| || | ||| | || ||| || Sbjct 27804 GTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAGCTT 27745 Query 66196 GCGTGCCTTCACCGT---ACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | || | ||| ||| | || || ||||| || || | ||||| ||| Sbjct 27744 CTGGGCACGGATCGTCTGACGACCACGACCCTCCTTT----TCATACTTCTCGTATAGGG 27689 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 || || || || | || | ||| | || |||| || || ||||| || | Sbjct 27688 CCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAG 27629 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| | | | || || || || ||| || |||||||| ||||| || || || Sbjct 27628 TCCAGTTCTCGTTCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGA 27569 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | || || ||||| || ||| || | |||||||| || || | ||| || ||||| | Sbjct 27568 ACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCGA 27509 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||| || | ||||| || || || ||||| || || | || || ||| ||||| Sbjct 27508 AGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTTGTTGCCAC 27449 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 | || || || || | || |||||||| || |||| ||| || | || || || | Sbjct 27448 CCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTGG 27389 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 || |||| ||||| ||| | ||| || ||| || || || |||||| || |||| Sbjct 27388 ATGTGCCGTTGGTACCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGTTGAGAC 27329 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCG-GCCACTGTCCGGAATATGCC 66669 | ||||| || ||| |||| ||||| ||||| || | | | || | | || || Sbjct 27328 CGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATACC 27271 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 ||||||| |||| |||| || | ||| ||||||| || || | | ||| || Sbjct 27270 GTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGGT 27211 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 |||| ||| || ||||| | ||| || |||||| | | | |||||||| ||||| Sbjct 27210 ACCGGCATTGAATAGAGTGGGAGAAGCATGAGTAAAGAACTTGTTGGACATGTAGTTGTA 27151 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849 |||||||||||| |||||||| || || ||| || | | | ||||| | | Sbjct 27150 GGTCTCGATGACACGTTCAATGTTATCACCCCAAATACCCACAGAAACACGCATGATCAT 27091 Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909 || ||| || || || || | | | |||| | | | ||||| || ||||| || Sbjct 27090 GTGTTGTGGGCGCTCAACAATCTTGCCGTTGAGCTTGAGGAGATAGGAACGCTCCAGTGT 27031 Query 66910 CTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||||| ||| |||||| || |||||||| Sbjct 27030 CTTGAAACCGAAGTACTGATAGTTGAAATC 27001 >seq9 Length=1081052 Score = 131 bits (144), Expect = 1e-25 Identities = 233/334 (70%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| |||||||| |||||||| | ||||| ||||| || Sbjct 1020888 ATCTGGCAAATGTACAAGAAGCACGAAGCTTCTTTCTGGACTGCTGAGGAAATCGATCTG 1020829 Query 61147 TCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAAC---ATTTCATTAA 61202 ||||| || | | |||||| | | ||| || || ||| | | | ||| | Sbjct 1020828 TCCAAGGATCTCCACGACTGGCACACCCGTAT-GAACGATGACGAGCGCTACTTCGTCTC 1020770 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || || || || ||||||||||| | | || || Sbjct 1020769 TCACGTTCTTGCCTTCTTCGCTGCCTCTGATGGCATTGTCAATGAGAACCTGGTTGAGCG 1020710 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| ||||| || | | ||||| ||||| |||||||| ||||||||| | Sbjct 1020709 CTTCAGCGC-TGAGGTCCAGATTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATTATGA 1020651 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | ||||| || || ||||||| ||| | || Sbjct 1020650 TGGAGAACATCCACTCAGAGACCTACTCCCTCCTCATTGACACATACATCAAGGAACAGG 1020591 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415 | |||| || |||||||||| || ||||| Sbjct 1020590 CTCAACGAGAGTATCTGTTCAATGCTATTGAGAC 1020557 Score = 114 bits (126), Expect = 1e-20 Identities = 281/423 (66%), Gaps = 5/423 (1%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 |||||||| | || |||||||| | || || | || || ||||||||||| ||||| Sbjct 1020410 GTCGAGGGCATCTTCTTCAGTGGTGCTTTCGCTTCTATTTTCTGGTTGAAGAAGCGTGGT 1020351 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| ||||| |||||| ||| ||| |||| || || |||||||| | || | Sbjct 1020350 CTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCCCGTGACGAGGGTCTTCACACT 1020291 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || || || ||| || | | ||||| || || | ||||| || Sbjct 1020290 GACTTCGC---TTGCCTACTCCACTCCCATCTGAACAACCGCGCAAGCAAGGAG-GTCAT 1020235 Query 61690 GGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 | ||| || | ||| || || || || || |||| || ||||||| || | || Sbjct 1020234 TGAGAGCATCATCACTGACGCCGTCACCATTGAGAAGGAGTTCTTGACTGAGGCCCTTCC 1020175 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 | | | | |||||||| || ||| |||||| || || ||||||||||| Sbjct 1020174 TTGCGCCATGCTGGGCATGAACGCCAACCTGATGAAGCAGTACATCGAGTTTGTTGCCGA 1020115 Query 61809 CCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 |||||| |||||| | | || | | | | || || ||| ||||| || || || Sbjct 1020114 CCGTCTTCTGGTCGCTCTCGGCAACGACAAGGTGTACAAGTCGACCAACCCCTTCGACTT 1020055 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||||| | || || || | ||||| || || || |||||||| || || || ||||| Sbjct 1020054 CATGGAGAACATCTCCCTTGGAGGCAAAACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 1019995 Query 61929 TCA 61931 || Sbjct 1019994 CCA 1019992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564186701680