Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 2e-13 >seq7 Length=1388246 Score = 93.3 bits (102), Expect = 2e-13 Identities = 210/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 |||||||| ||| ||| |||||||| | |||| || ||||| |||| ||| || ||| Sbjct 1379309 ACATCGTAGTAGATAACGTTCATGCCCATCGACTCAGCCAGGACGGAGAGCTGGGAGCCA 1379250 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAA 12853 |||| || || || || || || |||||||| || | | ||| | ||| | | ||| Sbjct 1379249 ATGTGGCCGTAGCCGACAATGCCGAGGGTCTTGCCACGGATTTCCCAGCA-CTTGGAGCT 1379191 Query 12854 GTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAG 12912 | | |||||||| |||| |||| | || ||| | || || | |||||| | || Sbjct 1379190 GACCTTGTTCCAGGTGCCGCGGTGCATCTCGTTGGAGCGGTCGCCGAGCTGACGGGCGAG 1379131 Query 12913 ATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATT 12972 || | | || |||| ||||| ||||| || | | |||| ||||| || || Sbjct 1379130 GCAGATGATCTCACCAATGACCAGCTCGGCCACACTGCGTGAGTTGGCGAAGGGTGAGTT 1379071 Query 12973 AAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCA 13032 ||||| ||||| || | || || ||| || | || || | | || ||||| Sbjct 1379070 GAAGACGGCAATACCCTGGCGGGCGGCATAGTCGAGGTCGACTTGGTTGGTGCCGATGCA 1379011 Query 13033 GAAGCATCCTATG 13045 ||||||||| ||| Sbjct 1379010 GAAGCATCCGATG 1378998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884867393865791