Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq11 172 3e-41 >seq11 Length=2503103 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2468109 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2468167 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2468168 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2468224 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2476210 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2476268 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2476269 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2476325 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2484324 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2484382 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2484383 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2484439 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2492434 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2492492 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2492493 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2492549 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2500546 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAA--ATAACATCGTCC 2500603 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2500604 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2500660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399911260