Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11 708 0.0 >seq11 Length=2503103 Score = 708 bits (784), Expect = 0.0 Identities = 561/665 (84%), Gaps = 14/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 2474779 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2474720 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2474719 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2474660 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||| Sbjct 2474659 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2474600 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | || ||| || || | | |||| || ||| |||| ||| Sbjct 2474599 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2474542 Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 |||||||||||||||| | | ||| ||| ||| || | |||| ||||| || || Sbjct 2474541 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2474484 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| ||||||||||| | | ||| | || | || ||||||| |||||||| || Sbjct 2474483 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2474426 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 2474425 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2474366 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 2474365 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2474306 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 2474305 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2474250 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | | |||||||||||| |||||||||||| || |||||||||||||||||||| Sbjct 2474249 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2474190 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||| || | || || Sbjct 2474189 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2474130 Query 679 GGCGA 683 ||||| Sbjct 2474129 GGCGA 2474125 Score = 708 bits (784), Expect = 0.0 Identities = 561/665 (84%), Gaps = 14/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 2482893 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2482834 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2482833 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2482774 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||| Sbjct 2482773 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2482714 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | || ||| || || | | |||| || ||| |||| ||| Sbjct 2482713 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2482656 Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 |||||||||||||||| | | ||| ||| ||| || | |||| ||||| || || Sbjct 2482655 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2482598 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| ||||||||||| | | ||| | || | || ||||||| |||||||| || Sbjct 2482597 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2482540 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 2482539 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2482480 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 2482479 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2482420 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 2482419 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2482364 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | | |||||||||||| |||||||||||| || |||||||||||||||||||| Sbjct 2482363 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2482304 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||| || | || || Sbjct 2482303 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2482244 Query 679 GGCGA 683 ||||| Sbjct 2482243 GGCGA 2482239 Score = 708 bits (784), Expect = 0.0 Identities = 561/665 (84%), Gaps = 14/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 2491003 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2490944 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2490943 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2490884 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||| Sbjct 2490883 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2490824 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | || ||| || || | | |||| || ||| |||| ||| Sbjct 2490823 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2490766 Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 |||||||||||||||| | | ||| ||| ||| || | |||| ||||| || || Sbjct 2490765 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2490708 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| ||||||||||| | | ||| | || | || ||||||| |||||||| || Sbjct 2490707 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2490650 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 2490649 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2490590 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 2490589 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2490530 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 2490529 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2490474 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | | |||||||||||| |||||||||||| || |||||||||||||||||||| Sbjct 2490473 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2490414 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||| || | || || Sbjct 2490413 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2490354 Query 679 GGCGA 683 ||||| Sbjct 2490353 GGCGA 2490349 Score = 708 bits (784), Expect = 0.0 Identities = 561/665 (84%), Gaps = 14/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 2499115 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2499056 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2499055 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2498996 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||| Sbjct 2498995 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2498936 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | || ||| || || | | |||| || ||| |||| ||| Sbjct 2498935 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2498878 Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 |||||||||||||||| | | ||| ||| ||| || | |||| ||||| || || Sbjct 2498877 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2498820 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| ||||||||||| | | ||| | || | || ||||||| |||||||| || Sbjct 2498819 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2498762 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 2498761 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2498702 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 2498701 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2498642 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 2498641 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2498586 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | | |||||||||||| |||||||||||| || |||||||||||||||||||| Sbjct 2498585 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2498526 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||| || | || || Sbjct 2498525 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2498466 Query 679 GGCGA 683 ||||| Sbjct 2498465 GGCGA 2498461 Score = 598 bits (662), Expect = 2e-168 Identities = 545/664 (82%), Gaps = 29/664 (4%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| || Sbjct 2466719 TGTAAAGCTCCTTCGACGAGTCGAGTATTT--GGAATGCTGCTCTAAATGG-AGGTACAT 2466663 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2466662 TTCTTCTAAA-CTAAATATTGGCCAGA-ACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2466605 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| ||| || |||||| |||||||||||||||| |||||||||||||| Sbjct 2466604 TGAAAAGCACTTTGAAAA-AGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2466546 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCGG 261 | ||||| |||||| | || ||| || || | | |||| || ||||| || ||| Sbjct 2466545 GTAACCA-ACTTGCGT-CGGTGAATCACCCAGCTCTCGCGGCTGGGGCACT--TCGCCGG 2466490 Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGG-ATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 |||||||||||||||| | | ||||| | ||| || | |||| ||||| | || Sbjct 2466489 CACAGGCCAGCATCAGCTTG--CCGTCGGGACAAAAGCTTCAGGAACGTGGCTCTCTC-- 2466434 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379 ||| ||||||||||| | | ||| | || | || ||||||| ||||||| || Sbjct 2466433 GGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGCGGG-CTGAGGTACGCGCTC--GCA 2466377 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | | Sbjct 2466376 AGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACC 2466317 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 2466316 TTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 2466257 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || | | ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 2466256 ----GCTTCGGCGAATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 2466201 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || | | |||||||||||| |||||||||||| || || |||||||||||| |||| Sbjct 2466200 TATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTA-GGTGAAGCCAGA--AAAC 2466144 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 | |||||||||||||||||||||||| |||||||||||||||||||| || | || ||| Sbjct 2466143 T-TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCAT-GGG 2466086 Query 680 GCGA 683 |||| Sbjct 2466085 GCGA 2466082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999270700