Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11 708 0.0
>seq11
Length=2503103
Score = 708 bits (784), Expect = 0.0
Identities = 561/665 (84%), Gaps = 14/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2474779 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2474720
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2474719 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2474660
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 2474659 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2474600
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | || ||| || || | | |||| || ||| |||| |||
Sbjct 2474599 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2474542
Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||||||| | | ||| ||| ||| || | |||| ||||| || ||
Sbjct 2474541 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2474484
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| ||||||||||| | | ||| | || | || ||||||| |||||||| ||
Sbjct 2474483 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2474426
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 2474425 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2474366
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 2474365 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2474306
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2474305 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2474250
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | | |||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 2474249 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2474190
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| |||||||||||||||||||| || | || ||
Sbjct 2474189 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2474130
Query 679 GGCGA 683
|||||
Sbjct 2474129 GGCGA 2474125
Score = 708 bits (784), Expect = 0.0
Identities = 561/665 (84%), Gaps = 14/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2482893 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2482834
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2482833 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2482774
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 2482773 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2482714
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | || ||| || || | | |||| || ||| |||| |||
Sbjct 2482713 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2482656
Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||||||| | | ||| ||| ||| || | |||| ||||| || ||
Sbjct 2482655 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2482598
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| ||||||||||| | | ||| | || | || ||||||| |||||||| ||
Sbjct 2482597 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2482540
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 2482539 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2482480
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 2482479 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2482420
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2482419 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2482364
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | | |||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 2482363 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2482304
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| |||||||||||||||||||| || | || ||
Sbjct 2482303 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2482244
Query 679 GGCGA 683
|||||
Sbjct 2482243 GGCGA 2482239
Score = 708 bits (784), Expect = 0.0
Identities = 561/665 (84%), Gaps = 14/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2491003 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2490944
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2490943 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2490884
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 2490883 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2490824
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | || ||| || || | | |||| || ||| |||| |||
Sbjct 2490823 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2490766
Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||||||| | | ||| ||| ||| || | |||| ||||| || ||
Sbjct 2490765 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2490708
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| ||||||||||| | | ||| | || | || ||||||| |||||||| ||
Sbjct 2490707 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2490650
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 2490649 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2490590
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 2490589 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2490530
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2490529 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2490474
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | | |||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 2490473 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2490414
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| |||||||||||||||||||| || | || ||
Sbjct 2490413 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2490354
Query 679 GGCGA 683
|||||
Sbjct 2490353 GGCGA 2490349
Score = 708 bits (784), Expect = 0.0
Identities = 561/665 (84%), Gaps = 14/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2499115 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTACAT 2499056
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2499055 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2498996
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 2498995 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2498936
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | || ||| || || | | |||| || ||| |||| |||
Sbjct 2498935 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 2498878
Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||||||| | | ||| ||| ||| || | |||| ||||| || ||
Sbjct 2498877 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 2498820
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| ||||||||||| | | ||| | || | || ||||||| |||||||| ||
Sbjct 2498819 GGGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 2498762
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 2498761 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 2498702
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| | | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 2498701 CTTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 2498642
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2498641 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 2498586
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | | |||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 2498585 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTAGGGTGAAGCCAGAGGAAA 2498526
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| |||||||||||||||||||| || | || ||
Sbjct 2498525 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCATGGG 2498466
Query 679 GGCGA 683
|||||
Sbjct 2498465 GGCGA 2498461
Score = 598 bits (662), Expect = 2e-168
Identities = 545/664 (82%), Gaps = 29/664 (4%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| ||
Sbjct 2466719 TGTAAAGCTCCTTCGACGAGTCGAGTATTT--GGAATGCTGCTCTAAATGG-AGGTACAT 2466663
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2466662 TTCTTCTAAA-CTAAATATTGGCCAGA-ACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2466605
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| ||| || |||||| |||||||||||||||| ||||||||||||||
Sbjct 2466604 TGAAAAGCACTTTGAAAA-AGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 2466546
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCGG 261
| ||||| |||||| | || ||| || || | | |||| || ||||| || |||
Sbjct 2466545 GTAACCA-ACTTGCGT-CGGTGAATCACCCAGCTCTCGCGGCTGGGGCACT--TCGCCGG 2466490
Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGG-ATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
|||||||||||||||| | | ||||| | ||| || | |||| ||||| | ||
Sbjct 2466489 CACAGGCCAGCATCAGCTTG--CCGTCGGGACAAAAGCTTCAGGAACGTGGCTCTCTC-- 2466434
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
||| ||||||||||| | | ||| | || | || ||||||| ||||||| ||
Sbjct 2466433 GGGAGTGTTATAGCCTGTTGCACAATACCCTTCGGCGGG-CTGAGGTACGCGCTC--GCA 2466377
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | |
Sbjct 2466376 AGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACC 2466317
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
| | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 2466316 TTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 2466257
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || | | ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 2466256 ----GCTTCGGCGAATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 2466201
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | | |||||||||||| |||||||||||| || || |||||||||||| ||||
Sbjct 2466200 TATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTGTA-GGTGAAGCCAGA--AAAC 2466144
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
| |||||||||||||||||||||||| |||||||||||||||||||| || | || |||
Sbjct 2466143 T-TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGCGCAT-GGG 2466086
Query 680 GCGA 683
||||
Sbjct 2466085 GCGA 2466082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999270700
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