Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq11 105 4e-21
>seq11
Length=2503103
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2467543 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2467599
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 2467600 GGCAGGGACGTAAT-CAACGCAAGCT 2467624
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2475635 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2475691
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 2475692 GGCAGGGACGTAAT-CAACGCAAGCT 2475716
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2483749 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2483805
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 2483806 GGCAGGGACGTAAT-CAACGCAAGCT 2483830
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2491859 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2491915
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 2491916 GGCAGGGACGTAAT-CAACGCAAGCT 2491940
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2499971 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2500027
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 2500028 GGCAGGGACGTAAT-CAACGCAAGCT 2500052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799904120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |