Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq11 735 0.0 >seq11 Length=2503103 Score = 735 bits (814), Expect = 0.0 Identities = 466/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2476796 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATCGTCACTACCT 2476855 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2476856 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2476915 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| || Sbjct 2476916 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCTA 2476975 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2476976 GAACACTACTCTAGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 2477035 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||||| ||| |||||||||||||| ||||| Sbjct 2477036 CAAGGCCATGCGATTCGAGAGGTTATTATGAATCGCCAGTGAGCCCCGAAGGGCATTGGT 2477095 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2477096 TTTTAATCTAATAAACACACCTCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 2477155 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2477156 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2477215 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||| Sbjct 2477216 GCCATTCGCAGTTTCACAGTA-AAATTATTTAAACTTAGACATGCATGGCTTAATCTTTG 2477274 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2477275 AGACAAGCATATGACTACTGGCAG 2477298 Score = 735 bits (814), Expect = 0.0 Identities = 466/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2484909 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATCGTCACTACCT 2484968 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2484969 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2485028 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| || Sbjct 2485029 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCTA 2485088 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2485089 GAACACTACTCTAGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 2485148 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||||| ||| |||||||||||||| ||||| Sbjct 2485149 CAAGGCCATGCGATTCGAGAGGTTATTATGAATCGCCAGTGAGCCCCGAAGGGCATTGGT 2485208 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2485209 TTTTAATCTAATAAACACACCTCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 2485268 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2485269 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2485328 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||| Sbjct 2485329 GCCATTCGCAGTTTCACAGTA-AAATTATTTAAACTTAGACATGCATGGCTTAATCTTTG 2485387 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2485388 AGACAAGCATATGACTACTGGCAG 2485411 Score = 735 bits (814), Expect = 0.0 Identities = 466/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2493020 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATCGTCACTACCT 2493079 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2493080 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2493139 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| || Sbjct 2493140 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCTA 2493199 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2493200 GAACACTACTCTAGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 2493259 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||||| ||| |||||||||||||| ||||| Sbjct 2493260 CAAGGCCATGCGATTCGAGAGGTTATTATGAATCGCCAGTGAGCCCCGAAGGGCATTGGT 2493319 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2493320 TTTTAATCTAATAAACACACCTCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 2493379 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2493380 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2493439 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||| Sbjct 2493440 GCCATTCGCAGTTTCACAGTA-AAATTATTTAAACTTAGACATGCATGGCTTAATCTTTG 2493498 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2493499 AGACAAGCATATGACTACTGGCAG 2493522 Score = 735 bits (814), Expect = 0.0 Identities = 466/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2501131 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATCGTCACTACCT 2501190 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2501191 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2501250 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| || Sbjct 2501251 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCTA 2501310 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2501311 GAACACTACTCTAGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 2501370 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||||| ||| |||||||||||||| ||||| Sbjct 2501371 CAAGGCCATGCGATTCGAGAGGTTATTATGAATCGCCAGTGAGCCCCGAAGGGCATTGGT 2501430 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2501431 TTTTAATCTAATAAACACACCTCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 2501490 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2501491 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2501550 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||| Sbjct 2501551 GCCATTCGCAGTTTCACAGTA-AAATTATTTAAACTTAGACATGCATGGCTTAATCTTTG 2501609 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2501610 AGACAAGCATATGACTACTGGCAG 2501633 Score = 719 bits (796), Expect = 0.0 Identities = 464/504 (92%), Gaps = 3/504 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 2468695 GTACTCATTCCAATTACAAGACC-AAAAGAGCCCTGTATCAGTATTTATCGTCACTACCT 2468753 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2468754 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2468813 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| || Sbjct 2468814 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCTA 2468873 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2468874 GAACACTACTCTAGCATCGAAAGTTGATAGGA-AGAAATTTGAATGAACCATCGCCGGCG 2468932 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||||| ||| |||||||||||||| ||||| Sbjct 2468933 CAAGGCCATGCGATTCGAGAGGTTATTATGAATCGCCAGTGAGCCCCGAAGGGCATTGGT 2468992 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2468993 TTTTAATCTAATAAACACACCTCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 2469052 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2469053 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2469112 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||| Sbjct 2469113 GCCATTCGCAGTTTCACAGTA-AAATTATTTAAACTTAGACATGCATGGCTTAATCTTTG 2469171 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2469172 AGACAAGCATATGACTACTGGCAG 2469195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399486464