Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq657 100 1e-15 >seq657 Length=61752 Score = 100 bits (110), Expect = 1e-15 Identities = 182/265 (69%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 21629 AGAAACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCC--C 21686 |||||| || ||| ||| |||| || |||||||| | |||| |||||||| | | Sbjct 3817 AGAAACGCCGGTGCTGCCGAATCCGCCAGCGCCGCGCACGCTCTCCTCGAGCTCGACGAC 3758 Query 21687 TTTTGCGCCTGCTGCAAAACTGGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGA 21746 | || | || | || || ||||||| || | |||||| ||||||||||| Sbjct 3757 CTCGACGAC--CT------CGGGAGTGAAGATGCGCTCGATGATGAGCTGGGCGATGCGG 3706 Query 21747 TCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTG 21806 ||||| | || |||||||| ||| | |||||||||||| | ||| ||||| | Sbjct 3705 TCGCCCTCGGCGACCTCAAAGTCAGTGTCGGCGTGGTTGAAGAGGAGGACCTTGACCTGG 3646 Query 21807 CCCCTATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGA 21866 || | || ||||| ||| ||||||||| ||||| |||||| | || || Sbjct 3645 CCGCGGTAGTCGGCGTCGATGACGCCGGCGCCGGTGTCGATGAAGTTCTTGGAAGCGAGG 3586 Query 21867 CCCGATCTGGGAGCGACGCGGCCGT 21891 || || | |||||| |||||||||| Sbjct 3585 CCAGAGCGGGGAGCAACGCGGCCGT 3561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084667675203972