Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq235 336 3e-90
seq520 127 3e-27
>seq235
Length=547
Score = 336 bits (372), Expect = 3e-90
Identities = 224/245 (91%), Gaps = 3/245 (1%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 60
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134
||||||||||| |||| || ||| ||||||||||||||||||| || | ||| || |
Sbjct 61 CAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCGTACTGCCAAAG-C 118
Query 135 GATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
|| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 119 AATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCA 178
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||
Sbjct 179 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAAT 238
Query 254 CTGTC 258
|||||
Sbjct 239 CTGTC 243
>seq520
Length=96894
Score = 127 bits (140), Expect = 3e-27
Identities = 159/217 (73%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 39 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA 98
|||| |||||| || || | | |||| ||||| ||| ||||||| ||| ||| |||| |
Sbjct 91925 AGAATATCTAAAGGTATTATAAACCTATTATTACCTTAAACTTCTATTAGCTT-AAGCTA 91867
Query 99 ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAG 158
|||||||||||||||||| || | || | ||| |||||||| | ||||||
Sbjct 91866 ATAGTCCCTCTAAGAAGCTAGTATACTACTAAAGTAATATAAGCTATTTAATAAGTTAAG 91807
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| || |||| |||||| | | |||| |||| || ||||||||||||| ||
Sbjct 91806 GTCTTATTTATTATTATAATTAAGTAAATAAATTACTCTACTAACTAAGAACGGCTATAT 91747
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|| || || ||| ||| || |||||||| | |||||
Sbjct 91746 ACTACTACTTATAAAATTAAAAAAGAGCTCTTAATCT 91710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796795692798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |