Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017-
01-05] 558 sequences; 52,387,045 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq235 230 4e-58
seq520 114 2e-23
>seq235
Length=547
Score = 230 bits (254), Expect = 4e-58
Identities = 142/152 (93%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 152 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 93
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 92 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 33
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||||||||||| |||||||||
Sbjct 32 GATGTTCTGGGCCGCACGCGCGTTACACTGAC 1
>seq520
Length=96894
Score = 114 bits (126), Expect = 2e-23
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 71 GCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||||||| ||| |||| || ||||||| ||| ||||| |||| | |
Sbjct 91849 GCTTCTTAGAGGGACTATTAGCTTAAGCTAATAGAAGTTTAAGGTAATAATAGGTTTATA 91908
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|| || |||||| |||| || | | || ||| | ||||| || ||| | |
Sbjct 91909 ATACCTTTAGATATTCTAAGCTATATATATGTTATACTAATAGAGCTAATAAGTACTT-- 91966
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
| || || |||| || |||||||| ||||||||| | | || ||||||||||||
Sbjct 91967 CTTTAGCTAAAAGGCCTAAGTAATCTTATTAAACTCTATTATACTAAGGATAGAGCATTA 92026
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
||||||| ||||| || |||||| |||||||
Sbjct 92027 TAATTATTACTCTTTAATAAGGAATCTTTAGTAAG 92061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194714624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |