Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq469 100 1e-15 >seq469 Length=188749 Score = 100 bits (110), Expect = 1e-15 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| |||||||| || ||||||| | | ||||||||||| ||||| ||| || || | Sbjct 166945 CAATTGTCATACGGGAAGGAATGGCGTGCGGGTTGATGATAATGTCTGGCGTAATACCCT 166886 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | |||||||| ||||| ||||| || || | | | ||||||||| ||||| || | | Sbjct 166885 CGGCGGTAAAAGGCATGTCTTCTTGACGATAGGTTACACCAATGGTACCCTTCTGTCCGT 166826 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || || ||||| || ||||| Sbjct 166825 GACGTGATGCGAACTTATCACCAAT 166801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884872924240294