Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2847 713 0.0
seq151 351 4e-94
seq1538 324 6e-86
>seq2847
Length=8172
Score = 713 bits (790), Expect = 0.0
Identities = 561/664 (84%), Gaps = 12/664 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct 3497 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 3438
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3437 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 3378
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 3377 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 3318
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | | || ||| || |||| | |||| || ||||| | | | |
Sbjct 3317 GTGACCAGACTTGCGCCCGGTGAATCACCCAGCCCTCGCGGCTGGGGCACTTTGCCG-GC 3259
Query 262 TCAGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
|||||||||||||||||| | ||| ||| ||| | ||||| || || | |||||
Sbjct 3258 ACAGGCCAGCATCAGCTCGCCGTCGG--GGACAAAAGTAGGGGGAACGTAGCTCTCTTCG 3201
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
||| |||||||||||| ||| | || | || ||||||| |||||||| ||
Sbjct 3200 GGGAGTGTTATAGCCCCCTACATAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GCA 3143
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| |||| ||||||||| |||||||||||||||||| | |
Sbjct 3142 AGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACC 3083
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
| | |||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 3082 TTATGTGCGAGTGTTTGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 3023
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3022 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 2967
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | | |||||||||||| |||||||||||| || ||||||||||||||||||||||
Sbjct 2966 TATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTATAGGGTGAAGCCAGAGGAAAC 2907
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| || | || |||
Sbjct 2906 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGCGCATGGGG 2847
Query 680 GCGA 683
||||
Sbjct 2846 GCGA 2843
>seq151
Length=7550
Score = 351 bits (388), Expect = 4e-94
Identities = 474/655 (72%), Gaps = 8/655 (1%)
Strand=Plus/Plus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
||||||||| | ||| ||| |||| ||| | || |||| ||||||| ||||||
Sbjct 4066 AAGCTCCTTTAATAAGTTAAGTAGTTTAAAAATACTACTTAAAATAGGAGGTATATTTCT 4125
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||||||||||||| || |||||| |||||| | ||||||||| || |||||| ||
Sbjct 4126 TCTAAAGCTAAATATTAGCTAGAGACTAATAGCGTATAAGTAGAGTAATTAAAAGATAAA 4185
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||||||||| |||||| |||||| || | | |||||||| |||||||||||||| ||
Sbjct 4186 AAGCACTTTAAAAAGAGGGTTAAATAGTATATAAAATTGTTAAAAGGGAAGCGCTTATAA 4245
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT-CGGCCGGTGCACTCTTCTGCGGTCAG 265
| |||||| | | ||| | | | |||| | |||| | ||||| | || | ||
Sbjct 4246 CTAGACTTACGCCTAGTGAATTACCTAGCCCTTGCGGCTAGGGCACTTTGCTAGTAT-AG 4304
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|| || || |||| | ||||||| | ||||| || || | ||| ||| ||
Sbjct 4305 GCTAGTATTAGCTTGCTATTAGGGATAAAAGTAGGGGGAACGTAGCTCTCTTTAGGGAGT 4364
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
||||||||| ||| | | || || |||| ||||| |||||
Sbjct 4365 ATTATAGCCCCCTACATAATACCCTTTAGCAGG-CTAAGGTATACGCTCTATA-AGGATA 4422
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|| ||||||| ||| |||| ||| ||||| ||||||||| |||||||| | | | | |
Sbjct 4423 CTAGCGTAATAGTTACTAGCGACCCATCTTGAAACACGGACTAAGGAGTCAACCTTATGT 4482
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
| |||||||| ||||| |||||| | ||||||||||||||||||| ||||| || |
Sbjct 4483 GTGAGTGTTTAGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTT- 4541
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|||| | || ||| |||| | |||| | ||| ||||| |||||||| ||| |
Sbjct 4542 ---GGTGTATTATTGACTGATCTTAATGTTCTTAGATAGATTTAAGTAAGAGTATATAGG 4598
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
| |||| ||||| ||| |||||||| || ||||||| |||| |||||||||||||||
Sbjct 4599 GTTAGACCTAAAAGAAGGTAAACTATGCGTGTATAGGGTAAAGCTAGAGGAAACTCTGGT 4658
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||| |||| ||||||| |||| |||| ||| | |||| || ||||||||
Sbjct 4659 GGAGGCTTGCAGTGGTTCTGACGTGTAAATTGATTATTAAATATGCATATAGGGG 4713
>seq1538
Length=17301
Score = 324 bits (358), Expect = 6e-86
Identities = 473/659 (72%), Gaps = 10/659 (2%)
Strand=Plus/Minus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
||||||||| | ||| ||| |||| |||| | ||| |||| ||||||| ||||||
Sbjct 13219 AAGCTCCTTTAATAAGTTAAGTAGTTTAAGAATACTGCTTAAAATAGGAGGTATATTTCT 13160
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||| ||||||||| || |||||| |||||| | ||||||||| || |||||| ||
Sbjct 13159 TCTAAAACTAAATATTAGCTAGAGACTAATAGCGTATAAGTAGAGTAATTAAAAGATAAA 13100
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| ||||| |||||| |||||| || | | ||||| || |||||||||| ||| |
Sbjct 13099 AAGTACTTTAAAAAGAGGGTTAAATAGTATATAAAATTATTAAAAGGGAAGCACTTATGA 13040
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT-CGGCCGGTGCACTCTTCTGCGGTCAG 265
| |||||| | | ||| ||| | |||| | |||| | ||||| | ||| | |||
Sbjct 13039 CTAGACTTACGCCTAGTGAATCACCTAGCCCTTACGGCTAGGGCACTTTGCTG-GCACAG 12981
Query 266 GCCAGCATCAGCTCGGGCGGTCGG-ATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|| ||||| |||| || | || ||||| | |||||| | || | ||| ||| |
Sbjct 12980 GCTAGCATTAGCTTAC-CGTTAGGGATAAAAGTAGGGGGAATATAGCTCTCTTTAGGGAG 12922
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384
||||||||||| ||| | | ||| || |||| ||||||| || ||
Sbjct 12921 TGTTATAGCCCCCTACATAATACCCTTTGG-TGGGCTAAGGTATACGCTCCGTA-AGAAT 12864
Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444
||| ||||||| ||| ||| || |||| |||| ||| ||||||| | | | ||
Sbjct 12863 GCTAGCGTAATAGTTACTAGCAACCTATCTTAAAACATAGACTAAGGAGTTAACCTTATA 12804
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504
|| ||||||| ||||| |||||| | || |||||||||||||||| ||||| || |
Sbjct 12803 TGTAAGTGTTTAGGTGTTAAACCCCTACGTGTAATGAAAGTGAACGTAGGTGAGAGCT-- 12746
Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564
| || || | || || ||||| || | | ||||||||| |||||||| |||
Sbjct 12745 TTAGTGT--ATTATTAACTAATCCTAATATTCTTAGATGGATTTAAGTAAGAGTATATAG 12688
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
| | ||||| ||||| ||| ||||||| || ||||||| |||| |||||||||||| |
Sbjct 12687 GGTTGGACCTAAAAGAAGGTAAACTATGTGTGTATAGGGTAAAGCTAGAGGAAACTCTAG 12628
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||| |||||||||| | || ||||| || || |||| | |||||||| ||
Sbjct 12627 TGGAGGCTTACAGCGGTTCTAACATGTAAATCAATTGTTAAATATATATATAGGGGTGA 12569
Score = 239 bits (264), Expect = 2e-60
Identities = 452/658 (69%), Gaps = 8/658 (1%)
Strand=Plus/Minus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
||||||||| | ||| ||| |||| ||| | || |||| | ||||| |||| |
Sbjct 3699 AAGCTCCTTTAATAAGTTAAGTAGTTTAAAAATACTACTTAAAATAGAAGGTATATTTTT 3640
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||||||||||||| || | |||| |||||||| ||||||||| || |||||| ||
Sbjct 3639 TCTAAAGCTAAATATTAGCTAAAGACTAATAGCGCATAAGTAGAGTAATTAAAAGATAAA 3580
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| ||||| |||||| |||||| ||||| | ||||| || |||||||||||||| ||
Sbjct 3579 AAGTACTTTAAAAAGAGGGTTAAATAGCACATAAAATTATTAAAAGGGAAGCGCTTATAA 3520
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT-CGGCCGGTGCACTCTTCTGCGGTCAG 265
| |||||| | | ||| | | | |||| | |||| | | ||| || | | ||
Sbjct 3519 CTAGACTTACGCCTAGTAAATTACCTAGCCCTTGCGGCTAGGGTACT-TTATTAGTATAG 3461
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|| ||||| |||| ||||||| | |||||| | || | ||| ||| ||
Sbjct 3460 GCTAGCATTAGCTTACCATTAGGGATAAAAGTAGGGGGAATATAGCTCTCTTTAGGGAGT 3401
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
||||||||| | ||| | | | | || |||| || | | | |||
Sbjct 3400 ATTATAGCCCCCTATATAATAC-CCTTTAGTAGGCTAAGGTATATACT-CTACAAAGATA 3343
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|| ||||||| ||| || || |||| |||| ||| ||||||| | | | |||
Sbjct 3342 CTAGCGTAATAGTTACTAGTAACCTATCTTAAAACATAGACTAAGGAGTTAACCTTATAT 3283
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
||||||| ||| | |||||| | | |||| ||||| || | || || | |
Sbjct 3282 ATAAGTGTTTAGGTATTAAACCCCTATACATAATAAAAGTAAATATAAGT--AAAAGCTT 3225
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| || | || || ||||| || | | ||| ||||| |||||||| |||
Sbjct 3224 TAGCGT--ATTATTAACTAATCCTAATATTCTTAGATAGATTTAAGTAAGAGTATATAGA 3167
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
| |||| ||||| ||| |||||| | | |||||||||||| |||||||||||||||
Sbjct 3166 GTTAGACCTAAAAGAAGGTAAACTATACGTATATAGGGTGAAGCTAGAGGAAACTCTGGT 3107
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | |||||||||| ||| |||| |||||| |||| | |||||||||||
Sbjct 3106 GGAGGCTTGTAGCGGTTCTGACGTATAAATTGATCGTTAAATATACATATAGGGGCGA 3049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079906520900
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