Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4267 140 8e-31 >seq4267 Length=45729 Score = 140 bits (154), Expect = 8e-31 Identities = 200/280 (71%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 36618 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 36677 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 36678 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 36737 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | | |||| ||||||| || ||||||| ||| |||| | | | || | ||| Sbjct 36738 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCAACACCAAATCTTTTGATAAT 36796 Query 187 CCCATCAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 | || |||||| |||||| ||||||| | |||||| | |||| || | ||| Sbjct 36797 TTAGTTAAATTCGTTAACCAGCCGGCATCGGGCAGACATCACACTCAATACTTCGATTTT 36856 Query 242 ---CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || ||| ||||||||||||| | |||||||||| Sbjct 36857 TAATCTTTTAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 36896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260745054336