Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2847 493 2e-137 seq151 352 5e-95 seq1538 316 3e-84 seq993 77.0 6e-12 >seq2847 Length=8172 Score = 493 bits (546), Expect = 2e-137 Identities = 287/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 756 TACTAAGCTCAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 814 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 815 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 874 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 875 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 934 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 935 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 994 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 995 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1049 >seq151 Length=7550 Score = 352 bits (390), Expect = 5e-95 Identities = 256/295 (87%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| |||| ||| ||| || ||||||||||||||||||| ||||| Sbjct 6803 TACTAAGCTTAATTACTATTGCAACGA-GGTTATTAGTAGGGTAAAACTAACCTATCTCA 6745 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||| |||| || |||||||||||||||| ||||||| ||||||||| || Sbjct 6744 CAACGGTCTAAACCTAGCTTACATTCCCTATTAGTGGGTAAACAATCTAACGCTTACTGA 6685 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||| |||| |||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct 6684 ATTCTGCTTTAGTATAATAGGAAGAGCCAACATCAAAGGATCAAAAAGCAACATCGCTAT 6625 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||||| Sbjct 6624 AAACGCTTGGCCGCCATAAGCTAGTTATCCCTGTAATAACTTTTCTAGCACCTCTAGCCT 6565 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||| |||||| ||||||| ||||||| |||| || Sbjct 6564 TAAATTTCAAGGGACTAAAGGATTAATAGGCTACACTTTTATGGTTTATATTTAC 6510 >seq1538 Length=17301 Score = 316 bits (350), Expect = 3e-84 Identities = 248/295 (84%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| |||| | | ||| || ||||||||||||||||||| ||| | Sbjct 10482 TACTAAGCTTAATTACTATTGCAACAA-GGTTATTAGTAGGGTAAAACTAACCTATCTTA 10540 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | |||||||||| |||| ||||||||||||||| |||||| |||| ||||||||| | Sbjct 10541 TAATGGTCTAAACCTAGCTTACGTTCCCTATTAGTAGGTGAATAATCTAACGCTTACTAA 10600 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||| |||| ||||||||||| |||| |||||| |||||| ||| ||||||| Sbjct 10601 ATTCTGCTTTAGTATAATAGGAAGAGCTAACATTAAAGGATTAAAAAGTAACATCGCTAT 10660 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||| | | |||| |||||||||| ||||||||||||| ||||||||||||| Sbjct 10661 AAACGCTTAGCTACTATAAGCTAGTTATCCCTATGGTAACTTTTCTAGCACCTCTAGCCT 10720 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||| |||||| ||||||| || |||| |||| || Sbjct 10721 TAAATTTCGAGGGACTAAAGGATTAATAGGCTACACTTTTATAGTTTATATTTAC 10775 Score = 271 bits (300), Expect = 1e-70 Identities = 238/295 (81%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| |||| ||| ||| || ||||||||||||||||||| ||| | Sbjct 962 TACTAAGCTTAATTACTATTGCAACGA-GGTTATTAGTAGGGTAAAACTAACCTATCTTA 1020 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| | |||||||||||| ||| || |||| ||||||||| | Sbjct 1021 TAATAGTCTAAACCTAGCTTATATTCCCTATTAGTAGGTAAATAATCTAACGCTTACTAA 1080 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||||||| | || |||||| |||||| ||||| |||| Sbjct 1081 ATTCTACTTTAGTATAATAGGAAGAGCTAATATTAAAGGATTAAAAAGTAACGTTACTAT 1140 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||| | | |||| |||||||||| | ||||||||||| | ||||||||||| Sbjct 1141 AAACGCTTAGCTACTATAAGCTAGTTATCCCTATAGTAACTTTTCTAGTACCTCTAGCCT 1200 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||| |||||| ||||||| || |||| |||| || Sbjct 1201 TAAATTTTAAGGGACTAAAGGATTAATAGGCTACACTTTTATAGTTTATATTTAC 1255 >seq993 Length=105152 Score = 77.0 bits (84), Expect = 6e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 |||||||| | |||||||||| ||||||||| | ||||||||||||||||||||| Sbjct 10014 TGGTAACTCTCCTGGCACCTCAAGCCTCAAAATCCGAGGGACTAAAGGATCGATA 9960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854362765248