Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2185 95.1 5e-14 >seq2185 Length=109607 Score = 95.1 bits (104), Expect = 5e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| ||||| ||||||| | | ||||| || |||||||| || ||||| | Sbjct 94480 CAATGGTCATGCGAGACGGAATGGCGTGGGGGTTAATAATGATGTCGGGTGTGATGCCCT 94421 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||| ||||||||||| || | | | | | ||||||||| ||||| || | | Sbjct 94420 CGGCGGTGAAGGGCATATCCTCCTGTCGGTAGGTAACACCAATGGTACCCTTCTGACCGT 94361 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || || |||||||||||||| Sbjct 94360 GACGCGACGCGAACTTGTCGCCAAT 94336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884781153833694